Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0843 ATGGCAACCTTCGACTCCTTCAGAGACATGTACGACATTGCACTCAAACCTCGTCTCCTCAACACTCTCATCAGAGACAATCTCCCTACAGTGGACCACCCCTTTTCCAACCCTTCCCAACTCTCCAACGTTGTCTCTTTGATCAAAACACACTCTCTCTTATCCGAGGATGTCACAGAATCTATGGACCCTAAACAAATTAAAGCTTGGAAATCATCTGTTGCTTCGTGGGTCGACCGTGTTTTGCTTCTTATTTCTAGTCGTGAGCCTGATAAACGTTGGGCAGGAATATCCTTGCTAGGGGTTACTTGTGAAGAGTGCAGTTCTGATCGTTTCCAAGAATCTTACACCGTGTGGTTCCAGAAGTTGCTGACTTCTCTACAGTCACCGGAAGATTCTCATTTTGTGAGGGTGGCTACTTGTGCTTCCATATCTGATCTACTTGCAAGGTTAAGTGGATTTCCAAAATTCAAGAAAGATGGGTCTGCCTCTGCTGTGAAAGTTGTTCAGCCTGTTCTAAAGATGTTACATGATGACAATTCAGAGGCAGTATGGGAAGCTGCAGTTCATGTGATATATACCTTGATAACTTCATTCCCATTTTCTATTCAGCGTCATTATGATAGTGTTGAATCTGCCATTGCTGCTAAACTTGTGTCTGGAGGATGCAGTCATGATATGATGAAGAAACTTGTACATTGCCTTGCATTACTTCCAAAATCAAAAGGAGATGAAGAAAGCTGGTCTGTGATGATGCAGAAAATTTTGATTTCAATAAACGAACATTTAACTTTGACATTTGAAGGTGTAGAAGAAGAATTCATTCTAAAGGAGTTCAATGGATTGTTGATTCTTCCTGGGAAACAACCTCCACCACCTTTAGGAGGCAATGTATCAAATGAAGAAGCTAGTAGCAACACAACAAAGAGGTCCAAACAATCGCGAATATATAATGTCCCTATACTTATGTCTGGTTGTTGTATGCTGCTCACAAATACATATCCAGTTAAGGTTAATGTACCTGTTCGCCTATTATTGGTCCTTGTTGAGAGAATTCTGACGGTAAATGGCGCTTTGCCAGCAATGTCATTGCCATTCATGACCGCCAGACAGCAAGAGAGAATTTGTTCCGAACTTCCAGCTTTGCATATGTGTAGCCTGGAATTGCTTACAGCTATTATAAAGGCAACAGGAAGTCAACTATTACCCCATGCTGCCTCTATTGTACGTTTCATTACAAAGTACTTCAAGGCGTGTGCGCTGCCAGATTTAAGGATTAAAGTCTATTCAATTGCAAAGACTCTGCTCATATCCATGGGTGTTGGAATGGCTTTATGCCTGTCGAAGGAAGTTGTCAATAATGCTATTGCTGATTTGAGTACCGTAGAGAAGAAGAATGGAGGCATGTTGAATGGTTCTAATACAGAAGTCTCCACGATAGCGCCACTACCAGCAAGTAATAGAAAAAGAAAGCACAGCAGTACAAATGGTTCTGTTCAGGAATATGACGCTGGTGGTGGTTTGGGAGTAGAAGTTCCAAATAAATGTCCCGTGACTCCAATTTCTCTGAGGGTAGCTGCACTTGAGGCATTAGAGGCTCTTATTACTGTGGCTGGTGCTTTAAAATCAGAACAGTGGAGATCCAAAGTTGATAGTCTTTTGATAGTCATAGCAATGGATTCTTTCAAAGAAGGTTCATCTCGTGAAGAAATAAATGTGTTTCAGAAAAAGGATCATGCTGCAACTGCCACAGATTTGCAATTTGCTGCATTGCGTGCTCTTTTGGCCTCTTTTCTATCTGTGTCCCGGCCCCCATATTTATCACAGGGCCTTGAACTTTTCCAAAGAGGAAAGCAACAAACTGGAACAAAGCTCGCCGAGTTCTGTGCTCATGCCATGTTAACCTTGGAAGTGCTTATACATCCTAGGGCACTTCCGCTGGTTGATTATGTCCCTCCAAACAACGATAATTTTGGTGAAGCTCAGTTCAGTTTCGGACATGAATATGCTAGCCGGAATCATACTACATTTGGTTTGCCTCAAACAGAACCTCCTGAATCTGTTAATAATCTGTTTGCTGACTATTTGGCAAATGGTGATGATGAGATGGGTGGGTTATGGACTGAAAATACAAAAAAAACTAAAGTGTCTTCTGAAATGGCGACATCCCTGCCTTCTAGCGCCAACATCCAAGAGAGGAGTGAGATGGTACCTGAGATAGCGACACGTGCAGATGTTGAGATGAGAACCGTCGAGAATGAAACCACAATGAAGTCAGATCATCCTGGAGAATCTGTCGTGCAATTTCAAGAACCTGTCCATTGCACGACAAGTATTCCGGCTGCCATTGACATTCACAGCGATGCGGCTACTGACAAAGAGCCGGAGAGGATTGTTTCAGAAAGTGCAATAGCTCATAATGAAGCCAATCATGTGGAATCAGCTTCACAGAGCAAAAGTTCAGCACAGTCATCAGATACTAACATGCTTCAGCAAGTTGAATTCAAGCTAGATTATGGCAATTCAGTGGATGATGATGATGACGATCCTTTTCCTGACATTGTGGATGGAGACCCTAATTCTGATTCTGAATAA 2595 0.4224 MATFDSFRDMYDIALKPRLLNTLIRDNLPTVDHPFSNPSQLSNVVSLIKTHSLLSEDVTESMDPKQIKAWKSSVASWVDRVLLLISSREPDKRWAGISLLGVTCEECSSDRFQESYTVWFQKLLTSLQSPEDSHFVRVATCASISDLLARLSGFPKFKKDGSASAVKVVQPVLKMLHDDNSEAVWEAAVHVIYTLITSFPFSIQRHYDSVESAIAAKLVSGGCSHDMMKKLVHCLALLPKSKGDEESWSVMMQKILISINEHLTLTFEGVEEEFILKEFNGLLILPGKQPPPPLGGNVSNEEASSNTTKRSKQSRIYNVPILMSGCCMLLTNTYPVKVNVPVRLLLVLVERILTVNGALPAMSLPFMTARQQERICSELPALHMCSLELLTAIIKATGSQLLPHAASIVRFITKYFKACALPDLRIKVYSIAKTLLISMGVGMALCLSKEVVNNAIADLSTVEKKNGGMLNGSNTEVSTIAPLPASNRKRKHSSTNGSVQEYDAGGGLGVEVPNKCPVTPISLRVAALEALEALITVAGALKSEQWRSKVDSLLIVIAMDSFKEGSSREEINVFQKKDHAATATDLQFAALRALLASFLSVSRPPYLSQGLELFQRGKQQTGTKLAEFCAHAMLTLEVLIHPRALPLVDYVPPNNDNFGEAQFSFGHEYASRNHTTFGLPQTEPPESVNNLFADYLANGDDEMGGLWTENTKKTKVSSEMATSLPSSANIQERSEMVPEIATRADVEMRTVENETTMKSDHPGESVVQFQEPVHCTTSIPAAIDIHSDAATDKEPERIVSESAIAHNEANHVESASQSKSSAQSSDTNMLQQVEFKLDYGNSVDDDDDDPFPDIVDGDPNSDSE* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0843 864 PANTHER PROLINE-, GLUTAMIC ACID- AND LEUCINE-RICH PROTEIN 1 9 861 - -
Mtr8g0843 864 PANTHER PROLINE-, GLUTAMIC ACID- AND LEUCINE-RICH PROTEIN 1 9 861 - -
Mtr8g0843 864 MobiDBLite consensus disorder prediction 809 864 - -
Mtr8g0843 864 MobiDBLite consensus disorder prediction 841 864 - -
Mtr8g0843 864 Pfam rRNA processing/ribosome biogenesis 27 222 IPR012583 -
Mtr8g0843 864 Gene3D - 71 605 IPR011989 -
Mtr8g0843 864 MobiDBLite consensus disorder prediction 809 835 - -
Mtr8g0843 864 SUPERFAMILY ARM repeat 76 617 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0843 Mtr-Chr8 10422959 10433292 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0843 - - aprc:113850109 1079.7