Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0837 ATGGCTTCGGAAAGCATGGCTTCGGAGGATGTGAAGAGTGGCGAATCAGCGGTGACGAAGATCGTGAATTTGGCGGAGGAAGCTAAGCTCGCTAGAGAAGGTGTTGTTAAAGCGAAGCCTAACTATGCGTTTGGTAGCATCTGCAAATCTCTCGTTGCTGGTGGTGTCGCCGGAGGAGTATCACGAACTGCTGTTGCTCCGCTCGAACGAATGAAAATTTTGCTACAGGTCCAGAATCCTCATAACATAAAATACAGTGGAACAATACAAGGCCTGAAATATATATGGAGAACTGAAGGATTCCGTGGACTTTTCAAGGGAAATGGTACTAATTGTGCTAGAATTGTCCCAAATTCTGCTGTGAAGTTCTTCAGTTATGAGCAAGCTTCTAAAGGTATACTGCATTTGTATCGGCAGCAAACTGGAAATGAGGATGCTCAGCTGACTCCTGTTTTACGTCTTGGAGCTGGAGCATGTGCTGGAATAATTGCTATGTCTGCAACTTATCCGATGGATATGGTCCGAGGCAGGATAACCGTTCAGACTGAGAAATCCCCTTATCAGTACAGAGGAATGTTCCATGCTTTGAGTACTGTGCTCAGGGAAGAAGGACCACGTGCTTTATATAAGGGCTGGCTTCCTTCAGTAATTGGAGTTATTCCTTATGTAGGTCTCAACTTTGCTGTCTATGAGTCTCTGAAAGATTATTTGATTAAAACTAAACCATTTGGTCTAGCCCAAGATTCTGAGTTGAGTGTGACAACACGCCTTGCCTGTGGTGCTGCTGCCGGAACTATTGGACAAACTGTTGCTTACCCTCTTGATGTCATTCGTCGAAGAATGCAGATGACCGGTTGGCACAATGCTGCTTCTGTTATAACTGGGGATGGAGTAGGCAAAGTCCCACTTGAATATACTGGAATGGTTGATGCATTTAGGAAAACTGTTCGGCACGAGGGATTCGGTGCATTATACAAGGGTCTGGTGCCCAATTCTGTTAAGGTGGTTCCATCCATAGCGCTTGCATTTGTATCATATGAGATGGTGAAGGACATTTTAGGAGTGGAGATCAGAATATCAGACTAA 1086 0.4475 MASESMASEDVKSGESAVTKIVNLAEEAKLAREGVVKAKPNYAFGSICKSLVAGGVAGGVSRTAVAPLERMKILLQVQNPHNIKYSGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILHLYRQQTGNEDAQLTPVLRLGAGACAGIIAMSATYPMDMVRGRITVQTEKSPYQYRGMFHALSTVLREEGPRALYKGWLPSVIGVIPYVGLNFAVYESLKDYLIKTKPFGLAQDSELSVTTRLACGAAAGTIGQTVAYPLDVIRRRMQMTGWHNAASVITGDGVGKVPLEYTGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIALAFVSYEMVKDILGVEIRISD* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0837 361 PANTHER BNAA09G39370D PROTEIN 6 356 - -
Mtr8g0837 361 SUPERFAMILY Mitochondrial carrier 47 348 IPR023395 -
Mtr8g0837 361 PRINTS Mitochondrial carrier protein signature 50 63 IPR002067 GO:0055085
Mtr8g0837 361 PRINTS Mitochondrial carrier protein signature 63 77 IPR002067 GO:0055085
Mtr8g0837 361 PRINTS Mitochondrial carrier protein signature 107 127 IPR002067 GO:0055085
Mtr8g0837 361 PRINTS Mitochondrial carrier protein signature 163 181 IPR002067 GO:0055085
Mtr8g0837 361 PRINTS Mitochondrial carrier protein signature 209 227 IPR002067 GO:0055085
Mtr8g0837 361 PRINTS Mitochondrial carrier protein signature 260 282 IPR002067 GO:0055085
Mtr8g0837 361 ProSiteProfiles Solute carrier (Solcar) repeat profile. 148 236 IPR018108 -
Mtr8g0837 361 ProSiteProfiles Solute carrier (Solcar) repeat profile. 251 352 IPR018108 -
Mtr8g0837 361 PANTHER SOLUTE CARRIER FAMILY 25 6 356 - -
Mtr8g0837 361 ProSiteProfiles Solute carrier (Solcar) repeat profile. 45 132 IPR018108 -
Mtr8g0837 361 Gene3D Mitochondrial carrier domain 44 355 IPR023395 -
Mtr8g0837 361 Pfam Mitochondrial carrier protein 47 132 IPR018108 -
Mtr8g0837 361 Pfam Mitochondrial carrier protein 148 239 IPR018108 -
Mtr8g0837 361 Pfam Mitochondrial carrier protein 250 353 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0837 Mtr-Chr8 10353778 10360431 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0837 21 356 EF-hand Containing Proteins AT5G51050 37.168 8.28e-67 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0837 K14684 - gmx:100814032 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0837 8 10353778 10360431 Mtr8g0837 8 10353778 10360431 ECH