Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0782 ATGACAGAGTTAACAGTGAAAACCCCACCTCAAATGCAATCATTTGGTGTTTTCCTCCGTGAACCACCACAGAATGAGTCCACCGATGATGATAACCACCGGAACCAATCACCCGCGATGAGGAAAACCATAAAGAAAACAATAATCATTGATGAATCTTCCTTAGAGAATCCTGATTTGGGTCCATTTCTTCTGAAGATGGCAAGAGATACCATAGCTTCTGGTGAGAATCCAGAAAAGGCTTTGGATTATGCAATTCGGGCATCCAAGTGTTTTGAACGGGTTTTGGGTCCGGGTGTGGATCTTGCCACGTGTTTACATGTTGTTGCTGCAATTTATTGTAGTTTGGGGAATTTGGATGCGGCTATTGAGGAGTTGGAAAGGTCTATTATGTTGTTGGATGTTGAAAACGGGTCGGGTCATGCTATGGTGAAGTTTTCTGGATATATGCAACTTGGTGATACTTATTCTATGACTGGATTGTTGGATAGATCCATTCTGTGTTATGAGTCGGGTTTGAAGATTCAAATGGATATTTTGGGTAAGTCCGACCCGAGAGTTGCTGAGACTTGCAGGTACTTAGCTGAAGCCCATGTTCAAGCCATGCAATTCGACGATGCAGAGCACTTCTGCAAGAAGACACTGGAAATTCATAGGGAGCATTGCTCACCCGCTTCCCTTACTGAAGCAGCGGACCGGCGCCTCATGGCCCTTATCTGTGAAGCAAAGGGAGATTATGAGCCAGCACTCGAGCATCTTGTCCTAGCCAGCATGGCGATGATTGCTAACGGACAAGATAACGAAGTTGCAGCTATTGATGTTAGCATCGGAGATATTTACTCGTCGCTATCTCGTTTCGACGAAGCTGTCTTCGCCTATCAGAAAGCGCTGACAGTGTTCAAATCCACCCAGGGTGAAAATCACAGTTCTGTTGCTTTAGTGTACATTCGACTCGCAGATCTTTACTGTAAGACTGGAAAATTACGAGAGTCAACGTCCTATTGCGAAAATGCGTTAAGAATATACAGTAAACCTATGCCTGGAATAACCGCCGGAGAGATTGCAAGTGGATTGACTGAAATCTCTGCCATCTATGAAGCTCTAAACGAGCCCGAGGAGGCGCTGAAGCTTTTGCAGAAGGCTGTAAAATTATTGGAGGGTATCCCGGGACAATATAGGACAATGGCAGGAATTGAAGCTCAAATGGGAGTGTTGTTCTACATGGTCGGACGGCATGTGGATGCATGGAAATCTTTTGATAATGCTGTCACCAAGCTGAGAGCCGGTGGGGAGAGGAAATCTGCATTTTTTGGATTTGTGTTGAACCAGATGGGTTTGGCATGTGTTCAACTGTATAAAATTGAAGAGGCTGCCACACATTTTGAAGAAGCTAGAGATATATTGGAGAGGGAATATGGAACCTATCATTTGGACACTCTTGGAGTGTATAGCAACCTAGCTGCAACTTATGATGCCTTGGGAAGAGTTGAAGATGCCATTCAGATATTGGAATACATACTCAAAATGAGAGAAGAAAAACTTGGAACTGCAAATCCAGATGTTGATGATGAAAAGAAAAGACTGTTTGAGCTTTTGAAAGAAGCCGGCAGAGTTCGAAGTAGAAAGGGAACATCTCTTGAAAACCTTATAGATTCAAACTCCTTAAAGATGAAGAAAGAAGCAAGAAGGAAACGGGGTGCATTTGGTTTTAGAACTTAG 1719 0.4357 MTELTVKTPPQMQSFGVFLREPPQNESTDDDNHRNQSPAMRKTIKKTIIIDESSLENPDLGPFLLKMARDTIASGENPEKALDYAIRASKCFERVLGPGVDLATCLHVVAAIYCSLGNLDAAIEELERSIMLLDVENGSGHAMVKFSGYMQLGDTYSMTGLLDRSILCYESGLKIQMDILGKSDPRVAETCRYLAEAHVQAMQFDDAEHFCKKTLEIHREHCSPASLTEAADRRLMALICEAKGDYEPALEHLVLASMAMIANGQDNEVAAIDVSIGDIYSSLSRFDEAVFAYQKALTVFKSTQGENHSSVALVYIRLADLYCKTGKLRESTSYCENALRIYSKPMPGITAGEIASGLTEISAIYEALNEPEEALKLLQKAVKLLEGIPGQYRTMAGIEAQMGVLFYMVGRHVDAWKSFDNAVTKLRAGGERKSAFFGFVLNQMGLACVQLYKIEEAATHFEEARDILEREYGTYHLDTLGVYSNLAATYDALGRVEDAIQILEYILKMREEKLGTANPDVDDEKKRLFELLKEAGRVRSRKGTSLENLIDSNSLKMKKEARRKRGAFGFRT* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0782 572 Pfam Tetratricopeptide repeat 269 343 - -
Mtr8g0782 572 Pfam Tetratricopeptide repeat 441 512 - -
Mtr8g0782 572 Gene3D Tetratricopeptide repeat domain 257 437 IPR011990 GO:0005515
Mtr8g0782 572 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 27 572 - -
Mtr8g0782 572 Pfam MalT-like TPR region 107 256 IPR041617 -
Mtr8g0782 572 MobiDBLite consensus disorder prediction 24 38 - -
Mtr8g0782 572 Gene3D Tetratricopeptide repeat domain 438 561 IPR011990 GO:0005515
Mtr8g0782 572 PANTHER KINESIN LIGHT CHAIN-LIKE PROTEIN 27 572 - -
Mtr8g0782 572 Gene3D Tetratricopeptide repeat domain 35 144 IPR011990 GO:0005515
Mtr8g0782 572 Gene3D Tetratricopeptide repeat domain 146 256 IPR011990 GO:0005515
Mtr8g0782 572 Coils Coil 116 136 - -
Mtr8g0782 572 MobiDBLite consensus disorder prediction 21 41 - -
Mtr8g0782 572 SMART tpr_5 438 471 IPR019734 GO:0005515
Mtr8g0782 572 SMART tpr_5 146 179 IPR019734 GO:0005515
Mtr8g0782 572 SMART tpr_5 480 513 IPR019734 GO:0005515
Mtr8g0782 572 SMART tpr_5 355 388 IPR019734 GO:0005515
Mtr8g0782 572 SMART tpr_5 312 345 IPR019734 GO:0005515
Mtr8g0782 572 SMART tpr_5 270 303 IPR019734 GO:0005515
Mtr8g0782 572 SMART tpr_5 103 136 IPR019734 GO:0005515
Mtr8g0782 572 SMART tpr_5 188 221 IPR019734 GO:0005515
Mtr8g0782 572 ProSiteProfiles TPR repeat profile. 270 303 IPR019734 GO:0005515
Mtr8g0782 572 SUPERFAMILY TPR-like 85 516 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0782 Mtr-Chr8 9656370 9660150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0782 77 315 Glycosyltransferase AT3G04240 23.600 6.09e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0782 - - gmx:100794697 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0782 8 9656370 9660150 Mtr8g0782 8 9656370 9660150 ECH