Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0781 ATGGCCAACTTTGTCACCTTGTTTATTCTATGGTTGAGTGTGATATGTACTACTTACAATGTCAAACTTATGGCACATTATGCAAGGGGAGAATCAACAAGGTTCTATGATTTCAAGGTTCAAACTAAAAGAGTTACAAAACTTTGCAACTCAAAAGACATTGTCACGGTCAATGGTATGTATCCAGGACCTGTTGTTTACGCGCAAGAAGATGACAGAATCATAGTCAAGGTTACCAATAAGACACCTTTCAATGTTACAATTCACTGGCATGGTATCCGGCAGCGGCTATCATGCTGGTATGATGGACCATCCTTTATTACACAATGTCCAATTCAAGCAGGCCAGAGTTTCACCTATAACTTTACAGTGGTGAATCAAAAGGGCACTTTCTTTTGGCATGCTCATGTTTCTTGGCTGAGAGGAACGGTTCATGGAGCTATGATTGTTTATCCAAAGAATAGGGTACCTTTCCCATTTAAGGCTCCTTATCAAGAGCAACTAATTATACTAGGGGAATATTGGCTGCAGGATCTTCAACAAATTGAGCATGCCACTCTAGTTAATGGAGGAGCTCCACCTCCAGCAGATGCATATACCATTAACAGTCACCCAGGCCCTAACTACAACTGCTCAATTAATGATGTGTACCAACTTAACGTGATTCCGGGAAGGACCTACTTGTTAAGACTAATAAATGCAGGTTTAAACACGGAGAACTTCTTTTCCATTGCTAATCACAACTTAACAATCGTGGAAGCTGATGGTGAATACACGAAGCCATTCACGACAGACACAGTGATGCTGGGACCAGGTCAAACACTGAATGTCCTAGTTTCAGCTGATCGACCAGTAGGAAAATACTCCATAGCTGTTGCACCTTACAAGTCTGGCAGGATTGTCAAATATCAAAATGTTTCAGCCATAGCCTACTTCAATTATATAGGGGCAGAATCTAACAGTTCGTATTTACCAGCTAAATTACCTAAACCTGATGATAAGCTGGCTGTTAAGACAGTCATGGACGGATTAAGGAGCCTAAATCAAGTGAGTGTTTTCAAAGAAATTGATAAAAATATATTCATCACCATTGGATTGAATGTTAAAAAATGCCACTCAAAGACACCCAAACAAAACTGTCAAGCCATGAATAATGGGGTGCTGACAGCTTCAATGAACAATATAAGTTTCGTTCATCCCCATATTTCAATCCTAGAAGCTTATTATAAGAAAATAAATGGATTGTACACTGAAGATTTTCCTGACGCACCCTCTAAGTTCTACGACTTCGTTAATGGTGCTCCTAACAACATTCCATATGACACGGAGTCATTGAATGGAACTAGAACTAAGGTCCTTGAATATGGTACCAAGGTGCAACTCATTTTGCAGAACACAGGAACAGTCAACATTGAAAATCACCCAATTCACATCCATGGCTACAGCTTTTACGTTGTAGGATATGGCACAGGAAACTATAATCCACTAACTGCACAATTCAATTTGGTGGATCCCCCATATATGAATACAATTGGAGTTCCGGTCGGTGGATGGGCAGCTGTCCGTTTTGTGGCTGATAATCCAGGTGTGTGGTACATGCACTGCCACATAGATATACACCAATCATGGGGACTAGGAATGGTATTTATAGTGAAGAATGGAAAAGGAGATCTGGAGTCTTTACCACATCCCCCACCAGATCTGCCAACATGTTAA 1716 0.4056 MANFVTLFILWLSVICTTYNVKLMAHYARGESTRFYDFKVQTKRVTKLCNSKDIVTVNGMYPGPVVYAQEDDRIIVKVTNKTPFNVTIHWHGIRQRLSCWYDGPSFITQCPIQAGQSFTYNFTVVNQKGTFFWHAHVSWLRGTVHGAMIVYPKNRVPFPFKAPYQEQLIILGEYWLQDLQQIEHATLVNGGAPPPADAYTINSHPGPNYNCSINDVYQLNVIPGRTYLLRLINAGLNTENFFSIANHNLTIVEADGEYTKPFTTDTVMLGPGQTLNVLVSADRPVGKYSIAVAPYKSGRIVKYQNVSAIAYFNYIGAESNSSYLPAKLPKPDDKLAVKTVMDGLRSLNQVSVFKEIDKNIFITIGLNVKKCHSKTPKQNCQAMNNGVLTASMNNISFVHPHISILEAYYKKINGLYTEDFPDAPSKFYDFVNGAPNNIPYDTESLNGTRTKVLEYGTKVQLILQNTGTVNIENHPIHIHGYSFYVVGYGTGNYNPLTAQFNLVDPPYMNTIGVPVGGWAAVRFVADNPGVWYMHCHIDIHQSWGLGMVFIVKNGKGDLESLPHPPPDLPTC* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0781 571 CDD CuRO_1_LCC_plant 36 152 IPR034288 GO:0005507
Mtr8g0781 571 PANTHER LACCASE-6 17 571 - -
Mtr8g0781 571 TIGRFAM laccase: laccase 33 571 IPR017761 GO:0046274|GO:0048046|GO:0052716
Mtr8g0781 571 Pfam Multicopper oxidase 40 154 IPR011707 GO:0005507
Mtr8g0781 571 ProSitePatterns Multicopper oxidases signature 2. 534 545 IPR002355 GO:0005507
Mtr8g0781 571 CDD CuRO_3_LCC_plant 416 554 IPR034289 GO:0005507
Mtr8g0781 571 Gene3D - 15 152 IPR008972 -
Mtr8g0781 571 Pfam Multicopper oxidase 167 316 IPR001117 -
Mtr8g0781 571 PANTHER MULTI-COPPER OXIDASE 17 571 IPR045087 -
Mtr8g0781 571 SUPERFAMILY Cupredoxins 354 571 IPR008972 -
Mtr8g0781 571 Pfam Multicopper oxidase 442 554 IPR011706 GO:0005507|GO:0016491
Mtr8g0781 571 SUPERFAMILY Cupredoxins 30 175 IPR008972 -
Mtr8g0781 571 CDD CuRO_2_LCC_plant 169 314 IPR034285 -
Mtr8g0781 571 Gene3D - 369 571 IPR008972 -
Mtr8g0781 571 SUPERFAMILY Cupredoxins 162 319 IPR008972 -
Mtr8g0781 571 Gene3D - 164 349 IPR008972 -
Mtr8g0781 571 ProSitePatterns Multicopper oxidases signature 1. 529 549 IPR033138 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0781 Mtr-Chr8 9642761 9646108 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0781 K05909 - gmx:100789406 1024.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0781 8 9642761 9646108 Mtr8g0781 8 9642761 9646108 ECH