Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0771 ATGAATCAAGTGAAACAATTTCATGGTTACACACTAAGAAATAACATAGACAACACCAAAATCCTCATTGAAAAACTACTTCAAATCCCAAACCTAAACTATGCACAAGTACTGTTACACCATTCTCAAAAACCAACCACTTTCCTCTACAACAAACTCATTCAAGCATGTTCCTCAAAACATCAATGTTTCACCCTTTACTCCCAAATGTACCTTCATGGTCACTCACCAAATCAATACACTTTCAACTTCCTTTTCACTACATGTACCTCACTTTCCTCACTTTCCCTTGGCCAAATGATCCATACCCAGTTCATGAAATCTGGTTTTAAACATGATGTATTTGCTTCAACTGCTTTGCTTGATATGTATGCCAAATTGGGTTGTTTGAAATTTGCACGCAATGTGTTTGATGAAATGTCTGTGAAAGAGTTGGCTACGTGGAATGCGATGATGGCGGGGTGTACAAGGTTTGGTGATATGGAAAGAGCGTTGGAGTTGTTTTGGTTGATGCCTTCGAGGAATGTGGTGTCATGGACTACTATGGTATCAGGTTACTTACAGAATAAGCAGTATGAGAAGGCTTTGGGATTGTTTATGAGGATGGAAAGGGAGAAAGATGTGAGTCCGAATGAAGTTACGTTGGCGAGTGTTTTGCCGGCTTGTGCGAATCTTGGAGCACTTGAGATTGGGCAGAGGGTTGAAGTATATGCGAGGAAAAATGGGTTTTTTAAGAATTTGTTTGTATGCAATGCTGTGTTGGAGATGTATGCAAAATGTGGGAAGATTGATGTTGCTTGGAAGGTGTTTGATGAGATCGGTAGATTCAGAAATCTGTGCTCTTGGAATTCGATGATCATGGGTTTAGCTGTTCATGGACAATGTCACAAGGCCATTCAGCTTTATGATCAAATGTTGCGAGAAGGAACTTTGCCTGATGACGTGACATTCGTGGGGCTTCTCTTGGCATGCACACATGGAGGCATGGTTGAAAAAGGCAAACATGTATTCCAGTCAATGACAAGAGACTTCAACATTATTCCCAAACTAGAACATTATGGCTGCATGGTTGATCTACTTGGTCGTGCCGGGCGATTAACAGAAGCTTACGAGGTCATAAAAAGAATGCCAATGAAGCCAGACTCGGTAATATGGGGTACTTTGTTGGGGGCTTGCAGTTTCCATGGTAATGTTGAATTGGCTGAGGTAGCAGCTGAGTCTTTATTTGTACTTGAGCCTTGGAATCCAGGAAATTACGTCATTCTTTCGAACATTTATGCATCCGCTGGGAAATGGGACGGAGTTGCAAAGCTCAGAAAGGTGATGAAGGGAAGCAAAATTACAAAGACAGCTGGACAGAGCTTCATTGAAGAGGGAGGTCAACTGCATAAGTTCATTGTGGAGGATAGATCACATTCAGAAAGTAGCGAAATTTTTGCTTTGCTAAATGGAGTTTATGAAATGATAAAGTTTGATAAAAATGAATATGAATGGCATTTGGATTTTGATTTGAACAAATAG 1521 0.405 MNQVKQFHGYTLRNNIDNTKILIEKLLQIPNLNYAQVLLHHSQKPTTFLYNKLIQACSSKHQCFTLYSQMYLHGHSPNQYTFNFLFTTCTSLSSLSLGQMIHTQFMKSGFKHDVFASTALLDMYAKLGCLKFARNVFDEMSVKELATWNAMMAGCTRFGDMERALELFWLMPSRNVVSWTTMVSGYLQNKQYEKALGLFMRMEREKDVSPNEVTLASVLPACANLGALEIGQRVEVYARKNGFFKNLFVCNAVLEMYAKCGKIDVAWKVFDEIGRFRNLCSWNSMIMGLAVHGQCHKAIQLYDQMLREGTLPDDVTFVGLLLACTHGGMVEKGKHVFQSMTRDFNIIPKLEHYGCMVDLLGRAGRLTEAYEVIKRMPMKPDSVIWGTLLGACSFHGNVELAEVAAESLFVLEPWNPGNYVILSNIYASAGKWDGVAKLRKVMKGSKITKTAGQSFIEEGGQLHKFIVEDRSHSESSEIFALLNGVYEMIKFDKNEYEWHLDFDLNK* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0771 506 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 2 456 - -
Mtr8g0771 506 TIGRFAM PPR: pentatricopeptide repeat domain 249 273 IPR002885 -
Mtr8g0771 506 TIGRFAM PPR: pentatricopeptide repeat domain 147 177 IPR002885 -
Mtr8g0771 506 TIGRFAM PPR: pentatricopeptide repeat domain 281 313 IPR002885 -
Mtr8g0771 506 TIGRFAM PPR: pentatricopeptide repeat domain 353 376 IPR002885 -
Mtr8g0771 506 TIGRFAM PPR: pentatricopeptide repeat domain 177 212 IPR002885 -
Mtr8g0771 506 Pfam PPR repeat 352 377 IPR002885 -
Mtr8g0771 506 Pfam PPR repeat 118 142 IPR002885 -
Mtr8g0771 506 Pfam PPR repeat 249 274 IPR002885 -
Mtr8g0771 506 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 278 312 IPR002885 -
Mtr8g0771 506 Gene3D Tetratricopeptide repeat domain 343 409 IPR011990 GO:0005515
Mtr8g0771 506 Gene3D Tetratricopeptide repeat domain 22 144 IPR011990 GO:0005515
Mtr8g0771 506 Gene3D Tetratricopeptide repeat domain 145 234 IPR011990 GO:0005515
Mtr8g0771 506 Pfam PPR repeat family 174 223 IPR002885 -
Mtr8g0771 506 Pfam PPR repeat family 278 324 IPR002885 -
Mtr8g0771 506 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 246 276 IPR002885 -
Mtr8g0771 506 Gene3D Tetratricopeptide repeat domain 235 342 IPR011990 GO:0005515
Mtr8g0771 506 SUPERFAMILY TPR-like 7 315 IPR011990 GO:0005515
Mtr8g0771 506 Pfam E motif 395 457 IPR046848 -
Mtr8g0771 506 PANTHER OS06G0125600 PROTEIN 2 456 - -
Mtr8g0771 506 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 144 178 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0771 Mtr-Chr8 9529720 9533070 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0771 41 490 Glycoside Hydrolase AT3G49170 36.726 3.29e-92 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0771 - - gmx:100790321 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0771 8 9529720 9533070 Mtr8g0771 8 9529720 9533070 ECH