Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0760 ATGGGTTTGGTTGAAAAGAGTCCAAAGAATCTTCATTTGCATAGACACCATCTTCAACATAAGCAAGAGTTCAAAGGTGTTCCAAAAGGGTTTATGGCGATAAAAGTTGGTCTAGGAGAAGAACAACAAAGGTTTGTTGTGCCGGTGATGTACTTCAATCACCCTCTTTTCATTCAACTATTGAAAGAAGCAGAAGAAGAATATGGATTTGATCAAAAAGGAACCATTACTATTCCTTGTCATGTTGAAGAATTCAGAAACGTTCGTGGTTTGATTGATAGAGACAAAAATCTTCATCATCAACATGTTGGTTGTTTTGGTTTGTGA 327 0.3639 MGLVEKSPKNLHLHRHHLQHKQEFKGVPKGFMAIKVGLGEEQQRFVVPVMYFNHPLFIQLLKEAEEEYGFDQKGTITIPCHVEEFRNVRGLIDRDKNLHHQHVGCFGL* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0760 108 PANTHER SMALL AUXIN-UP RNA-RELATED 18 103 - -
Mtr8g0760 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 18 103 IPR003676 GO:0009733
Mtr8g0760 108 Pfam Auxin responsive protein 21 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0760 Mtr-Chr8 9265884 9266983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0760 9 99 Calmodulin-binding Proteins AT5G20810 42.391 5.44e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0760 - K14488 gmx:111188139 174.866
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0760 8 9265884 9266983 Mtr8g0760 8 9265884 9266983 ECH
Mtr8g0760 8 9265884 9266983 Mtr7g3904 7 55798839 55799627 ECH
Mtr7g3904 7 55798839 55799627 Mtr8g0760 8 9265884 9266983 PCT