Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0740 ATGGAGCTCGACCTCCGCTCTTTCCTTCCTGACGACACCGAAACCGATCTCCCGCCCATTCATCACCGTACCGTCGACGAAATTCTCAACGACTGCTCTTCCTCATCATCATCATCATCCTCACCCTCTCCTTCTCCACCTCCTTCTCCTTCTCCTTCTAATAACAAACCCACTCACTTTCCTCAACCCGTACCCGCATCCATTTCGGATCGGGTTGTGCAGAATGTGAGGGTCGGTGATAAACCTCCCCGGCCGCGCTTGTTCTCGTCGTTGTTTGGTCGTGTTACTCCGAATGCGAAACCCGGTGCTGCTCTTGCTGCTGCTGCTGCCGCGTCGAGATCTGTTCCGACTCCACATGCGGCGGCTATTATGCACCGGAGGAGAATTTCCAATTCGATTAAATCCGAATCGGATATTTCCGATGTTTTGAGTGAATTTGGTGAGAAAATTGAGAGGAGTGGGAGTGTTGGTGATGTTGATTTCAGAGGTGCTGAATTGGAGGAGAGATTTGAGGGTTTTGTGGAGAGGAGTGAGAGTGTTGGTGATGTTAGAATTGATGCAATTGAAGTGAATGAAGATGATGTGAATATGAAGAATGATGTGAAGAGTGATTTAGATAAGTGTTTTGTTTCTAATTTGTTGAATTCTGTTGAAAATAGTCATGATCATGATGATAACGGTTTGGATTCTACAAAGTCTACACCTTTTGATGTTGGTGGTGCTGAAAATGGTCATGATCATGATAGTAAGGGTTTGATTTCTGCATCTTTTGATGTTGTTGTTGATGATGTTGATGATGAAAATGAAGATAAGTTTGGTGAAAAAAGTAGTTTTGATTATGTTGGTGATAATGGTATTAATGAAAAAGAAGAAATTGTGAATGGTGTTGGTGTTGTTGAAGGTATTGGGAATGAAATGAATGATGATGGTGGCGGTGATGGTAGTGGTGAAGGTATTGGGAATGAAGTGAATGATGATGATGAAGTGAATGGTGGTGGTGGTGGTGATGATGGTAGTTCCATTGGTGATGTTTTTGAGCTGGTGGAGGAGACGCTCGAGGAATTGGAACAGGAAAGTAGAAGGGTTACAAAGAAAAAATTAGATTCTTTGAAGAAGCCGCTTGATTTAGCGGAGGAATTGGAGAAGAAGAATGCTTCAACTGGTTTACATTTGGAAGAGGGTGCTGCTGCGCAGCCAATGAGACTTGAGGGTGTACGGAGAGGGTCTATTACATTAGGTTATTTTGATGTTGATGCTGATAATGCAATCACGAGGGTCATTTCATCGCAAAATTTTAGACGCGAGCATGGTTCTGCTCAAGTTTTGGTAGTTCATGCTAATTACATTGCTGTTGGAATGACAAGAGGGCTTATTGTTGTAGTTCCTAGTAAATATTCCATTCATCACGTGGATAATACAGATGGAAAGATGTTGATGCTTGGTATACAAGGTGATCGATCACAAGCTCCAGTGACGTCCATGTCTTTCAATCAACAAGGAGATCTTCTTTTAGCTGGTTATGGTGATGGTCATGTTACACTTTGGGATGTACAGAAAGGGGTAGCTGTAAAAGTTATTAGTGGGGAGCATACTGCACCAGTGGTACATGCTTTTTTTCTAGGACAGGATCCTCAGAATACTCGTCAATTTAAAGCAGTTACGGGGGATTGCAAGGGTCTGGTTCTCTTGCATCATATCTCAATGGTTGTTTTGATTAATAGGTTCAACTTCAAAACTCAGTGTCTTCTTGATGGGCAAAATACTGGTTTGGTGCTATCTGCTTCACCCCTCTTTTCTGGAGAATTCGGAGGAAGTCCTTCTTATTCTCAAGGAAACACCATGGTCTCGGCCAGCAGTATAAGTAGCATGGTCGGGGGTGTTGTTGGGGGAGATGCAGGTTGGAAACTCTTCAACGAAGGCTCTTCTCTGGTTGAAGAAGGTGTGGTTGTATTTGTCACCCATCAAACTGCTTTGGTGGTACGACTCAGTCCTTCATTGGTAGCCTATGCTCAACTCCCCAGGCCAAATGGAATTCGGGAGGGTTCTATGCCATATACTGCATGGAAATACATGACACAAACAAGTAGTTCTACTGAGAATGCGTCTGCAGAAACTGTTGAAAGAGTTTCACTGCTTGCAATTGCTTGGGAACGCAAAGTTCAGGTTGCTAGGCTGGTCAAATCAGAATTAAAAGTATATGGAGAATGGTCTCTTGACAGTGCAGCTATAGGTCTGGCATGGTTGGATGATCAGATGCTGGTAGTTCTCACTTCAACCGGACAACTGAATTTATTTGCCAAGGATGGAACTGTGATTCACCAAACAAGTTTTGGTATAGATGGTATTGGAGGAGACGAACTGCTTTCATATCATACTCACTTCATCAACGTATATGGAAATCCTGAGAAAGCTTATCATAACGCCATTGCTGTAAGAGGAACTTCTATTTATATACTTGGTCCAACACATCTTATCATTTCTCGTCTTCTCCCTTGGAAAGAGCGTATCTTGGTTTTACGGAAAGCAGGTGACTGGATGGGTGCCTTGAACATGGCAATGACTCTTTATGATGGCCATGCTCATGGGGTTGTTGATCTACCTAGAACCTTGGATGCTATACATGAGGCTATAATGCCCTTCTTGGAGGAGTTGCTTACATCATATGTTGAAGAAGTGTTCTCCTATATTTCAGTGGCTTTCTGCAACCAAATTGGAAAACCTGATCAATCCAATGATTCAAATAGTATAAGCAATTCAGTGCATTCTGAAATAAAGGAGCAATACACTCGTGTTGGTGGCGTTGCTGTTGAATTTTGTTGTCATATCAAACGGACAGACATCCTTTTTGATAAAATTTTCTCCAAGTTTGTGGATGTTCATGTTCAACAGAGAGAAACATTTTTGGAACTTCTGGAGCCATATATTTTGAAGGACATGCTTGGATCTCTACCTCCCGAGATTATGCAAGAACTGGTAAAGTATTATAGCACGAAAGGGTGGTTGCAGCGGGTTGAACAATGCGTACTTCACATGGATATTTCATCATTGGATTTTAATCAGGTTGTCAGATTATGCCGGGAGCATGGACTATATAGTGCCCTGGTGTATCTCTTCAATAAAGGATTAGATGATTTTAGGGCACCTCTTGAGGAGCTGTTTGCAGTCCTACAAAATAGCCAGAAGGAAAATGCTACTGCACATGGGTATAGAATGCTGGTTTATCTCAAGTACTGCTTTACAGGTCTTGCCTTTCCACCAGGCCATGGAACTATTCCTCCTATGCGATTGCCATCTCTCAGAAAAGAACTTGTAGAGTTTTTGTTGGAGGATTCCAGTGCTACGAAATCACGGATAGTTTCAGATTCTGTGTCCAAACGGCCATACCTGAATCTATATCTTCTCTTAGAGTTAGACACTGAAGCTACATTAGATGTCCTCCGATGTGCTTTCATTGAAGATAAAAATTCAAATTCCAGCTCATCTTTACTGGAATCAGCTGATAGACCTATTGAAGAAGCAAAAGAAGAAAATAATAATGTCACTGGAACTGACAATATTTTAGTTCAGAATACAGTGGATGCTCTTATTCAAATAATTGATATGAATGTTGTTCCGACAGATACAACCTCTAGTAGTGGTGATGACGGATTAACAATGGAGTGGCCTTTGAAGGACAAAGGTTGTCTGTTTGAGTTTATTGCATATTATGTTGCTCACCAAAGAGCTAAAGTTTCAAAGGGCATGCTTTGTCGGATATTGGAATATCTCACATTGGATAACCACTTTTCAACTAATGTTTCCTCTCATAGTTCAACTCCAAAAAATAGAGAGAAGCAAGTGCTTGCACTTCTGGAAGTAGTTCCCGAGTCCGACTGGGATGTGCCATTTTTGCTAGACCTATGTGAGAGCGCCAAATATTATCAGGTTTGTGGATTGATTCATTCCATCAGACATGAGTATGTGGCTGCATTGGACAGCTATATGAAGGATGTAGATGAGCCGGTTCATGCCTTCTCCTTTATCAACAAAACATTCTCACTGTTGATTGGCAATGACCATACTGCTATCCGATCAGCAGTCCTATCTCGAATTCCTGAATTGGTTGAACTCAGCAGGGAAGGTGCATTCCATGTGGTTACCAGACATTTTAGTGATGAAAGTTCCCATGTCATCACTAAACTTCATTCTCACCCAAGAAGTCTTTTCCTTTATTTAAAGACACTCATTGAGCTTCACTTATTTGGCACCCTAGACTTGTCTCATTTGACAAAGGGTGTTATTACAAATCCCCCTAATGGAAAGCAGGTTAAGGATCCTCCACCAGGAATCCATGATTACTTAGAAAATATATCCGATTTCCCCAAGTACATGCGTGAAAATCCTAGTCATGTGCCTGATGATCTTATTGAGCTTTACCTAGAGCTGTTATGCCAGTATGAACGAGGTTCAGTTCTAAAATTTCTAGAAATGTTTGATAGCTATCGTGTGGAACATTGTTTACGCCTATGCCAAGAATATGGCATTTTAGATGCTGCTGCTTTCTTATTGGAAAGGGTTGGTGATGTTGGTAGTGCTCTTTCACTTACACTTTCTGATCTAAATGATAAATTTGTTGAGCTTGATGCTGTTGTGGAAGCTGTAGTTTCAAACCATCCTAAGCTTGATTATTCCCATATAGACGTATACAACACTGTTTTAAAGACAAAAGAGGTGAATGGCATGTATGATTTATTGCATGCCTGTATCGGCCTTTGTCAGCGTAACACGCCTCGTCTAAATCCTGAGGAGTCAGAAGCACACTGGTTTAAATTACTTGACTCGTTTTGTGATCCATTGATGGATTCATATGTTGAAGAGAAATCATATGAAAGAAAAAATTATTTTGGTGTTCTAGCCGGATCACCAGATTCACAACTGGACAAAGACACCTATAAAAGCAGTTGGAAGATTTCAAAGTCCCGAAATGGTGATATCTTGAGAAAATTGATATCCCAGTTCATTAAAGAGATTGTTGAGGGAATGATAGGTTATGTTCATCTTCCAGCTATCATGTCCAAACTCTTGAGTGATAATGGTAGTCAAGAATTTGGCTATTTTAAACTTACTATATTGGGGATGCTTGGAACGTATGGCTTTGAAAGAAGAATTCTGGATGCTGCCAAGTCCTTGATAGAGGATGATACATTCTATACCATGACTTTACTCAAGAAAGGGGCTTCTCATGGATTTGCTCCCAGGAGTTCAGTGTGTTGTATATGTAATTGCCTCCTAACAAAGAACTCAGTTACTAATGGAATTCGAATTTTCAACTGTGGCCATGCAATTCATCTCCATTGCGAAGCCTCTGAAGTCGAGTCGTCAAGCAAAGCATCTTCGTCTGGATGCCCTGTATGTATGCCTATCCAAAAACCCCAGAAGTCCAGAAACAAATCTATAATTACAGAGAATGGCTTAGTCAATAAATTATCATCAAGACGCCAATACCCTCATGGAAGTACAAGTCATCACCACCATGACAGTGATTTATCAGAGAATATGTATGGAGGACAGCAACAGATATCACGGTTTGAGATCTTGAGCAGCTTGCAGAAAAATCAAAGATTTATGCAATTTGAAAACTTGCCTCCATTGAGGCTTGCCCCGCCTGCTGTGTACCATGAAAAGGTAAGTAAAGTAGCACACTATCAGACTGGAGAAAGTAGCAACAATTCTGCAGTTATAGATAAACATAGTCGTCACAAACAAAACCGGGATCTGAGAGTCAGAGGTTCATCAATTCGTTTTCCTTTAAAATCAAGTTTTTTTGGCAAGGAAAAGACGAATAAGCGATGA 5832 0.4105 MELDLRSFLPDDTETDLPPIHHRTVDEILNDCSSSSSSSSSPSPSPPPSPSPSNNKPTHFPQPVPASISDRVVQNVRVGDKPPRPRLFSSLFGRVTPNAKPGAALAAAAAASRSVPTPHAAAIMHRRRISNSIKSESDISDVLSEFGEKIERSGSVGDVDFRGAELEERFEGFVERSESVGDVRIDAIEVNEDDVNMKNDVKSDLDKCFVSNLLNSVENSHDHDDNGLDSTKSTPFDVGGAENGHDHDSKGLISASFDVVVDDVDDENEDKFGEKSSFDYVGDNGINEKEEIVNGVGVVEGIGNEMNDDGGGDGSGEGIGNEVNDDDEVNGGGGGDDGSSIGDVFELVEETLEELEQESRRVTKKKLDSLKKPLDLAEELEKKNASTGLHLEEGAAAQPMRLEGVRRGSITLGYFDVDADNAITRVISSQNFRREHGSAQVLVVHANYIAVGMTRGLIVVVPSKYSIHHVDNTDGKMLMLGIQGDRSQAPVTSMSFNQQGDLLLAGYGDGHVTLWDVQKGVAVKVISGEHTAPVVHAFFLGQDPQNTRQFKAVTGDCKGLVLLHHISMVVLINRFNFKTQCLLDGQNTGLVLSASPLFSGEFGGSPSYSQGNTMVSASSISSMVGGVVGGDAGWKLFNEGSSLVEEGVVVFVTHQTALVVRLSPSLVAYAQLPRPNGIREGSMPYTAWKYMTQTSSSTENASAETVERVSLLAIAWERKVQVARLVKSELKVYGEWSLDSAAIGLAWLDDQMLVVLTSTGQLNLFAKDGTVIHQTSFGIDGIGGDELLSYHTHFINVYGNPEKAYHNAIAVRGTSIYILGPTHLIISRLLPWKERILVLRKAGDWMGALNMAMTLYDGHAHGVVDLPRTLDAIHEAIMPFLEELLTSYVEEVFSYISVAFCNQIGKPDQSNDSNSISNSVHSEIKEQYTRVGGVAVEFCCHIKRTDILFDKIFSKFVDVHVQQRETFLELLEPYILKDMLGSLPPEIMQELVKYYSTKGWLQRVEQCVLHMDISSLDFNQVVRLCREHGLYSALVYLFNKGLDDFRAPLEELFAVLQNSQKENATAHGYRMLVYLKYCFTGLAFPPGHGTIPPMRLPSLRKELVEFLLEDSSATKSRIVSDSVSKRPYLNLYLLLELDTEATLDVLRCAFIEDKNSNSSSSLLESADRPIEEAKEENNNVTGTDNILVQNTVDALIQIIDMNVVPTDTTSSSGDDGLTMEWPLKDKGCLFEFIAYYVAHQRAKVSKGMLCRILEYLTLDNHFSTNVSSHSSTPKNREKQVLALLEVVPESDWDVPFLLDLCESAKYYQVCGLIHSIRHEYVAALDSYMKDVDEPVHAFSFINKTFSLLIGNDHTAIRSAVLSRIPELVELSREGAFHVVTRHFSDESSHVITKLHSHPRSLFLYLKTLIELHLFGTLDLSHLTKGVITNPPNGKQVKDPPPGIHDYLENISDFPKYMRENPSHVPDDLIELYLELLCQYERGSVLKFLEMFDSYRVEHCLRLCQEYGILDAAAFLLERVGDVGSALSLTLSDLNDKFVELDAVVEAVVSNHPKLDYSHIDVYNTVLKTKEVNGMYDLLHACIGLCQRNTPRLNPEESEAHWFKLLDSFCDPLMDSYVEEKSYERKNYFGVLAGSPDSQLDKDTYKSSWKISKSRNGDILRKLISQFIKEIVEGMIGYVHLPAIMSKLLSDNGSQEFGYFKLTILGMLGTYGFERRILDAAKSLIEDDTFYTMTLLKKGASHGFAPRSSVCCICNCLLTKNSVTNGIRIFNCGHAIHLHCEASEVESSSKASSSGCPVCMPIQKPQKSRNKSIITENGLVNKLSSRRQYPHGSTSHHHHDSDLSENMYGGQQQISRFEILSSLQKNQRFMQFENLPPLRLAPPAVYHEKVSKVAHYQTGESSNNSAVIDKHSRHKQNRDLRVRGSSIRFPLKSSFFGKEKTNKR* 1944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0740 1943 Gene3D - 415 575 IPR015943 GO:0005515
Mtr8g0740 1943 ProSiteProfiles Trp-Asp (WD) repeats profile. 484 525 IPR001680 GO:0005515
Mtr8g0740 1943 PANTHER VACUOLAR PROTEIN SORTING VPS41 340 1871 IPR045111 GO:0006623
Mtr8g0740 1943 ProSitePatterns Trp-Asp (WD) repeats signature. 503 517 IPR019775 -
Mtr8g0740 1943 SUPERFAMILY RING/U-box 1749 1803 - -
Mtr8g0740 1943 Pfam Anaphase-promoting complex subunit 4 WD40 domain 474 531 IPR024977 -
Mtr8g0740 1943 PANTHER - 340 1871 - -
Mtr8g0740 1943 SUPERFAMILY WD40 repeat-like 472 771 IPR036322 GO:0005515
Mtr8g0740 1943 Coils Coil 345 372 - -
Mtr8g0740 1943 MobiDBLite consensus disorder prediction 1 70 - -
Mtr8g0740 1943 MobiDBLite consensus disorder prediction 1897 1923 - -
Mtr8g0740 1943 CDD RING-H2 1750 1799 - -
Mtr8g0740 1943 Pfam Region in Clathrin and VPS 1467 1535 IPR000547 GO:0006886|GO:0016192
Mtr8g0740 1943 MobiDBLite consensus disorder prediction 1 28 - -
Mtr8g0740 1943 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1404 1571 IPR000547 GO:0006886|GO:0016192
Mtr8g0740 1943 ProSiteProfiles Zinc finger RING-type profile. 1750 1798 IPR001841 -
Mtr8g0740 1943 MobiDBLite consensus disorder prediction 41 59 - -
Mtr8g0740 1943 MobiDBLite consensus disorder prediction 219 250 - -
Mtr8g0740 1943 MobiDBLite consensus disorder prediction 304 340 - -
Mtr8g0740 1943 MobiDBLite consensus disorder prediction 1906 1921 - -
Mtr8g0740 1943 Pfam Golgi CORVET complex core vacuolar protein 8 966 1150 IPR025941 -
Mtr8g0740 1943 MobiDBLite consensus disorder prediction 1158 1178 - -
Mtr8g0740 1943 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 484 520 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0740 K20178 - gmx:100780869 2620.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0740 8 8901528 8913595 Mtr8g0740 8 8901528 8913595 ECH