Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0739 ATGTCTTTCACTGCAACCAAATTCTCACACTCTCTTCTTGCTGTTCCTATCAATTCTTCAACTCCAAGATCCAATGATAAACCACTCTCTTTCTCTTCTGATCTCTTCAAACACAACGCTTCTTCTTCCTCTTTTCTTGGATCTACTCAGAAGCTTCTTCGTTTGAATGCTCGCCGTTCACCACCACCTGTTGCTGCTGTTCTTCTTCAACAAACCTCCAATTTGCTTATTACTAAAGAGGAAGGGTTAGTGCTTTATGAGGACATGGTGTTAGGAAGGTCCTTTGAAGACAAATGTGCTGAGATGTATTATAGGGGTAAAATGTTCGGTTTTGTCCACTTATACAATGGTCAAGAAGCTGTGTCAACTGGATTCATCAAGTATTTGAGGAAAGAAGATTGCATAGTCAGCACATACAGAGACCATGTTCACGCGTTGAGTAAAGGGGTCCCTTCTCGAGAAGTGATGAGTGAACTCTTCGGTAAGGCGACAGGATGTTGCCGAGGTCAGGGTGGTTCAATGCATATGTTCTCAAAAGAACACAACGTGCTCGGTGGTTTTGCATTCATTGGTGAGGGAATTCCAGTGGCCACTGGTGCTGCATTTTCCATGAAATACAAAAGAGAGGTGTTGAATCAGGCTGATTCTGATAATGTGACGTTGGCATTTTTCGGAGATGGAACTTGTAATAATGGACAGTTCTTTGAGTGTTTAAACATGGCTGCTTTGTGGAAATTACCAATTGTTTTTGTGGTGGAAAACAATTTGTGGGCCATTGGCATGTCACATCTTAGAGCAACTTCAGATCCTGAGATATGGAAAAAGGGTCCAGCATTCGGAATGCCAGGTGTTCATGTCGATGGGATGGATGTTTTGAAGGTCAGAGAAGTGGCGAAGGAGGCAATTGACAGGGCTAGAAGAGGAGAAGGACCATCTTTAGTGGAATGTGAGACTTACAGATTTAGAGGACATTCATTGGCTGATCCTGATGAGCTTCGTAACCCTGCTGAGAAGCAACACTATGCTGGTAGGGATCCCATCACTGCGTTGAAGAAATACCTTTTTGAGAACAAATTAGCCACTGAACAAGAATTGAAGGCAATAGACAAGAAAATTGACGAGGTCCTAGAGGAAGCTGTTGATTTCGCAGAAAAGAGCCCTGCACCAGCTCGCAGCCAGCTTCTAGAGAATGTCTTCGCCGATCCCAAAGGTTTTGGAATTGGACCAGATGGAAGGTATAGATGTGAGGATCCAAAGTTTACTGAAGGCACTGCTCATGTCTAA 1284 0.4346 MSFTATKFSHSLLAVPINSSTPRSNDKPLSFSSDLFKHNASSSSFLGSTQKLLRLNARRSPPPVAAVLLQQTSNLLITKEEGLVLYEDMVLGRSFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGFIKYLRKEDCIVSTYRDHVHALSKGVPSREVMSELFGKATGCCRGQGGSMHMFSKEHNVLGGFAFIGEGIPVATGAAFSMKYKREVLNQADSDNVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPEIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIDRARRGEGPSLVECETYRFRGHSLADPDELRNPAEKQHYAGRDPITALKKYLFENKLATEQELKAIDKKIDEVLEEAVDFAEKSPAPARSQLLENVFADPKGFGIGPDGRYRCEDPKFTEGTAHV* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0739 427 CDD TPP_E1_PDC_ADC_BCADC 85 383 - -
Mtr8g0739 427 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 15 427 - -
Mtr8g0739 427 Pfam Dehydrogenase E1 component 88 389 IPR001017 GO:0016624
Mtr8g0739 427 Gene3D - 32 408 - -
Mtr8g0739 427 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 73 402 IPR029061 -
Mtr8g0739 427 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 80 400 IPR017597 GO:0004739|GO:0006086|GO:0043231
Mtr8g0739 427 Coils Coil 358 378 - -
Mtr8g0739 427 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA 15 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0739 Mtr-Chr8 8895222 8899387 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0739 40 427 Acyl Lipid Metabolism Gene Families AT1G01090 81.955 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0739 K00161 - gmx:100811207 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0739 8 8895222 8899387 Mtr8g0739 8 8895222 8899387 ECH