Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0720 ATGGTGGTAGCTGCAGGTTCGAAGTTCAGTTTAAGAAGAGGAAACAGTGGTTCATGTTCTTCTAATAATGTTGTTATCAATGAAGAACTTTCTAGAATTAATAACAAAAGTGCTTGTTTTTCTCAAGACCCTTCTTGTGTTTCATTCACTACTTTTAATATCCTTGCTCCTATTTACAAAAGGATTGATCCACAGAATCAAGGACTCAGAGAAAGTGACTTCAGATCACGTTGGTTAGCTAGGAATCAAAGGATTCTTGATTCATTGCTTTCTGAATCGTCTTCCATTATGTGCTTACAGGAATTTTGGGTTGGAAATGAAGAACTTGTTCAAATGTTTGAGGAGAGACTTGGGGATGCTGGTTATCAACTTTTCAAACTTGCTCGAACCAACAACCGCGGAGATGGTCTGCTGACTGCTATACATAAAGAATACTTAAGTATTGTGAATTATCAAGAGTTGCTTTTCAATGATTGCGGTGACCGTGTTGCTCAGTTGTTGCATGTTCGATCAGTTAATCCCATTTTACAAAACCAAAAGGACAGTGTTCACCAAGAGTTTCTGATTGTGAATACTCACTTGCTATTTCCACATGATTCAAGTCTGTGTATAGTGAGATTGGATCAGGTTTATCAAATATTAAAATATGTGGAACAGTATCAGAAAGAAAACAGACTCAAACCAATGCCTATTATACTCTGCGGTGACTGGAACGGAAGCAAGCGTGGGCATGTTTACAAGTTCCTAAGGTCACAGGGATTTGTATCATCATATGATATTGCAAATCAATATACTGATAGTTATGCAGATGCACACAAGCAGTGGGTTAGTCACAGAAATCATAGAGGAAATATATGTGGCGTTGACTTCATTTGGCTTTGCAATCCTAACCAAGCGCGTAAGCCTTTGAAAACAAGTTGGTCTGAAGCTGTATTCAGTATACTGAAGTTCCAGCTTCGAAAGGCATCATTGTCTGAAGATGATGCATTTACCTTTCTGAAGGGTGACAACTATGCTGATTCTTCTGTGACATATTTTAGTTTTTCTGAAGCCCTCCGTCAGGTAAAGTTATTTGGCGTGCCTTATGGATTACGCTTTCAACAGTTGCAAGATCTATGGAATCAAGCTGATGTAGATGGAAATGGTGTCATCGACTTCGAAGAATTCAAGCAAAAGATTTGGAATTCTACATGTTCAGAGCATGTGTATGAAAATGTCAATGTGTACGTGAAGGATTCTAATACTGAGCAGGAGCAAGAAACCATTGGTTTTAAGGTGAAGAACGCGATGTTGTTTCCGCGTGAAGTGGAGAAAGGACTTTGGCCTGAAGATTACTCTCTTTCTGATCATGCTAGGTTGACTGCTGTATTTTCACCGGCAAAGATGTCATGTTCTTCATTATAA 1404 0.3868 MVVAAGSKFSLRRGNSGSCSSNNVVINEELSRINNKSACFSQDPSCVSFTTFNILAPIYKRIDPQNQGLRESDFRSRWLARNQRILDSLLSESSSIMCLQEFWVGNEELVQMFEERLGDAGYQLFKLARTNNRGDGLLTAIHKEYLSIVNYQELLFNDCGDRVAQLLHVRSVNPILQNQKDSVHQEFLIVNTHLLFPHDSSLCIVRLDQVYQILKYVEQYQKENRLKPMPIILCGDWNGSKRGHVYKFLRSQGFVSSYDIANQYTDSYADAHKQWVSHRNHRGNICGVDFIWLCNPNQARKPLKTSWSEAVFSILKFQLRKASLSEDDAFTFLKGDNYADSSVTYFSFSEALRQVKLFGVPYGLRFQQLQDLWNQADVDGNGVIDFEEFKQKIWNSTCSEHVYENVNVYVKDSNTEQEQETIGFKVKNAMLFPREVEKGLWPEDYSLSDHARLTAVFSPAKMSCSSL* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0720 467 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 6 464 - -
Mtr8g0720 467 ProSitePatterns EF-hand calcium-binding domain. 377 389 IPR018247 -
Mtr8g0720 467 ProSiteProfiles EF-hand calcium-binding domain profile. 364 399 IPR002048 GO:0005509
Mtr8g0720 467 SUPERFAMILY DNase I-like 40 273 IPR036691 -
Mtr8g0720 467 Pfam Endonuclease/Exonuclease/phosphatase family 76 261 IPR005135 GO:0003824
Mtr8g0720 467 SUPERFAMILY EF-hand 246 395 IPR011992 -
Mtr8g0720 467 Gene3D Endonuclease/exonuclease/phosphatase 25 463 IPR036691 -
Mtr8g0720 467 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 6 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0720 Mtr-Chr8 8650334 8654865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0720 112 465 EF-hand Containing Proteins AT1G02270 65.097 4.53e-170 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0720 - - gmx:100788191 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0720 8 8650334 8654865 Mtr8g0720 8 8650334 8654865 ECH