Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0697 ATGGCAGAGAAAGCATGCATCAAGCGCCTTCAGAAGGAGTATAGAGCACTTTGTAAAGAGCCAGTTTCCCATATTGTGGCCCGTCCTTCACCAAGTGATATTCTTGAGTGGCATTACGTATTGGAAGGAAGCGAGGGAACACCTTTCTCAGGTGGATATTACTATGGAAAAATCAAGTTTCCTCAGGAATATCCTTATAAACCTCCTGGAATCAGCATGACAACACCTAATGGGCGGTTCATGACACAGAAAAAGATCTGTCTATCAATGAGCGATTTTCATCCTGAAAGTTGGAATCCAATGTGGTCTGTATCAAGCATACTTACCGGGCTTCTTTCATTCATGATGGACACCAGTCCAACCACCGGCAGTGTAAACACTACTACTGTCGAGAAGCAGCGTCTAGCAAAATCTTCAATGTCTTTCAATTGTAAGAATGCAACATTCAGGAAGATGTTCCCTGAGTATGTGGAGAAGTACAACAAGCAGCAGCTTTCTGAGCAAGTTACTTCTGAGCAGCCGGCGTCATCAGAGACTGGTCAAGATAAAAGTCCAAGGTCTGTTTTGGAAAACAACAATTTAGAGTCCACAGGAGAAGACATGAAAAGGGTTGAGGGATTGAAGGATGTGAGGAGAAACAAAAAACAAGGATTTCCAACTTGGATGATGTTATTACTCTTCTCCATCTTTGGGGTTGTTATGGCATTACCTCTACTCCAGCTGTGA 726 0.4298 MAEKACIKRLQKEYRALCKEPVSHIVARPSPSDILEWHYVLEGSEGTPFSGGYYYGKIKFPQEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTVEKQRLAKSSMSFNCKNATFRKMFPEYVEKYNKQQLSEQVTSEQPASSETGQDKSPRSVLENNNLESTGEDMKRVEGLKDVRRNKKQGFPTWMMLLLFSIFGVVMALPLLQL* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0697 241 MobiDBLite consensus disorder prediction 164 208 - -
Mtr8g0697 241 CDD UBCc 7 157 IPR000608 -
Mtr8g0697 241 Pfam Ubiquitin-conjugating enzyme 9 124 IPR000608 -
Mtr8g0697 241 MobiDBLite consensus disorder prediction 164 195 - -
Mtr8g0697 241 SMART ubc_7 8 162 - -
Mtr8g0697 241 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 3 241 - -
Mtr8g0697 241 PANTHER BNAA06G11590D PROTEIN 3 241 - -
Mtr8g0697 241 SUPERFAMILY UBC-like 6 158 IPR016135 -
Mtr8g0697 241 Gene3D Ubiquitin Conjugating Enzyme 1 178 IPR016135 -
Mtr8g0697 241 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 5 162 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0697 Mtr-Chr8 8389235 8393838 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0697 1 241 Miscellaneous Gene Families AT1G17280 77.178 2.38e-138 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0697 K04554 - gmx:100778181 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0697 8 8389235 8393838 Mtr8g0697 8 8389235 8393838 ECH