Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0676 ATGAAGATGAAATTCATTGTGCAAAATCTTGGAGTCTCTATTTTCTTCAAAGTTTTCCTTATTATAGCTATTATATCTCAAACCTTTGGAAGCAAAACAGATTATTATAGAAGCAACAAAGCCTTGTTCATTTTTGGGGATTCATTCTTAGATGCTGGCAATAACAATTACATAAACACTACAACCTTTGACCAAGCAAATTTCTTGCCCTATGGAGAAACTTACTTCAACTTCCCAACAGGTCGATTCTCTGATGGCCGTTTGATATCAGATTTTATTGCTGAATACGTAAATATTCCACTGGTTCCACCATTTCTACAACCTGACAATAACAAATATTACAATGGAGTGAATTTTGCATCTGGTGGAGCAGGTGCACTTGTTGAAACTTTCCAAGGCTCGGTAATACCTTTCAAAACACAAGCAATAAACTTCAAGAAAGTAACAACTTGGTTGAGGCACAAGTTAGGCAGTTCTGATTCCAAAACATTGTTATCAAATGCTGTCTACATGTTTAGCATCGGATCTAATGATTATCTTAGCCCATTTTTGACAAATTCTGATGTTCTAAAACATTATTCTCATACAGAATATGTTGCCATGGTGATTGGTAACTTCACTTCTACTATCAAGGAAATACATAAGAGAGGGGCTAAAAAATTTGTGATTTTAAACTTACCACCCTTGGGATGTCTTCCAGGAACTAGAATAATTCAATCACAAGGAAAAGGCTTTAAGGAAGGAAAATCAGCATGTTGTGGGAGTGGACCATTTAGAGGAGAGTATAGTTGTGGTGGAAAAAGAGGAGAGAAACACTTTGAATTATGTGACAAACCCAATGAAAGTGTATTTTGGGATTCTTACCATCTTACAGAAAGTGCTTACAAACAATTGGCAGCTCAAATGTGGAGTCCTACTGGAAACTCTCATACTATTGGGTCTTACACTATTAGAGATTTCTTTCAAGCAATGTGA 975 0.359 MKMKFIVQNLGVSIFFKVFLIIAIISQTFGSKTDYYRSNKALFIFGDSFLDAGNNNYINTTTFDQANFLPYGETYFNFPTGRFSDGRLISDFIAEYVNIPLVPPFLQPDNNKYYNGVNFASGGAGALVETFQGSVIPFKTQAINFKKVTTWLRHKLGSSDSKTLLSNAVYMFSIGSNDYLSPFLTNSDVLKHYSHTEYVAMVIGNFTSTIKEIHKRGAKKFVILNLPPLGCLPGTRIIQSQGKGFKEGKSACCGSGPFRGEYSCGGKRGEKHFELCDKPNESVFWDSYHLTESAYKQLAAQMWSPTGNSHTIGSYTIRDFFQAM* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0676 324 CDD SGNH_plant_lipase_like 41 304 IPR035669 -
Mtr8g0676 324 SUPERFAMILY SGNH hydrolase 42 303 - -
Mtr8g0676 324 Gene3D SGNH hydrolase 34 245 IPR036514 -
Mtr8g0676 324 Pfam GDSL-like Lipase/Acylhydrolase 42 233 IPR001087 GO:0016788
Mtr8g0676 324 PANTHER GDSL ESTERASE/LIPASE 5 244 322 - -
Mtr8g0676 324 PANTHER GDSL ESTERASE/LIPASE 5 13 243 - -
Mtr8g0676 324 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 244 322 IPR044552 -
Mtr8g0676 324 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 13 243 IPR044552 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0676 Mtr-Chr8 8063781 8067374 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0676 41 304 Acyl Lipid Metabolism Gene Families AT4G10950 27.864 1.26e-35 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0676 - - mtr:MTR_8g022810 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0676 8 8063781 8067374 Mtr8g0676 8 8063781 8067374 ECH