Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0671 ATGACTTTGTTTGACATGGATTTGAGTAGTGTAGTGAACAATTTCTTGAATCATGTTCATGAAACTCCTTCAAGGGATCATGAGAATCATGAGAGCAGAAGAAGGGCTTCTAGTATCCCGGTGGACATTTTGGATACTCCTAAAGAGTATATATTTTTCTTGGATGTTCCTGGTCTCTCCAAGTCTGAAATTCAGGTGACAATTGAAGATGAGAACACACTTGTCATAAAGAGCAATGGAAAAAGAAAACGGCAAGATGGTGAGGATGAAGGCTGCAAGTACATTAGGCTGGAGAGGAGAGCACCTCAGAAACTGCTGAGGAAGTTCCGTTTGCCAGAGAATGCAAATGTGTCAGCAATCACAGCCAAATGTGAGAATGGTGTTCTAACTGTGAATGTTGAGAAGCACACTCCACCTCCAAAATCGAAAACAGTTGAAGTTGCTATTGCATAA 453 0.4106 MTLFDMDLSSVVNNFLNHVHETPSRDHENHESRRRASSIPVDILDTPKEYIFFLDVPGLSKSEIQVTIEDENTLVIKSNGKRKRQDGEDEGCKYIRLERRAPQKLLRKFRLPENANVSAITAKCENGVLTVNVEKHTPPPKSKTVEVAIA* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0671 150 Pfam Hsp20/alpha crystallin family 42 147 IPR002068 -
Mtr8g0671 150 CDD ACD_sHsps-like 42 135 - -
Mtr8g0671 150 Gene3D - 3 149 IPR008978 -
Mtr8g0671 150 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 32 150 IPR002068 -
Mtr8g0671 150 PANTHER 17.4 KDA CLASS III HEAT SHOCK PROTEIN 18 150 - -
Mtr8g0671 150 SUPERFAMILY HSP20-like chaperones 26 142 IPR008978 -
Mtr8g0671 150 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 18 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0671 Mtr-Chr8 8020607 8021541 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0671 K13993 - gmx:100803161 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0671 8 8020607 8021541 Mtr8g0671 8 8020607 8021541 ECH