Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0657 ATGGTTAAGTTGACTATGATTGCCCGTGTTACTGATGGTCTTCCATTGGCTGAAGGAATGGATGATGCTCGCGATCTTAAAGATGGTGAACTTTACAAACAGCAAGTCAAGTCTTTGTTTAAGAATCTATCAAGAGGGCATAATGAGGCATCAAGGATGTCAGTTGAAAGTGGTCCTTATGTTTTTCATTATATTATAGAAGGACGGGTCTGTTACTTGACAATGTGTGATCGGGCATACCCCAAGAAACTAGCATTTCAGTATCTTGAAGAGCTCAGGAATGAATTTGAGCGTGTTAATGGGTCTCAAATTGAAACTGCTGCCAGACCTTATGCCTTCATTAAGTTTGACGCATTTATACAGAAGACAAAGAAACTTTACCAGGATACCCAGACACAGCGTAATATTGCAAAGTTGAATGATGAACTTTATGAAGTCCACCAGATTATGACTCGTAATGTGCAGGAAGTTCTTGGTGTTGGTGAACAGTTGGATCAGGTCAGTCAATTGTCCAGTCGCTTATCATCTGAATCCCGCATATATGCTGACAAGGCTAGAGATTTAAATAGACAGGCTCTGATTCGGAAATGGGCCCCTGTTGCTATTGTTTTTGGAGTTGTCTTTGTACTTTTCTGGCTCAAGAACAAAATTTGGTGA 657 0.4033 MVKLTMIARVTDGLPLAEGMDDARDLKDGELYKQQVKSLFKNLSRGHNEASRMSVESGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEELRNEFERVNGSQIETAARPYAFIKFDAFIQKTKKLYQDTQTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEQLDQVSQLSSRLSSESRIYADKARDLNRQALIRKWAPVAIVFGVVFVLFWLKNKIW* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0657 218 ProSiteProfiles Longin domain profile. 6 120 IPR010908 -
Mtr8g0657 218 PANTHER VESICLE-TRAFFICKING PROTEIN SEC22B 1 218 IPR044565 GO:0005484|GO:0006888|GO:0006890
Mtr8g0657 218 SUPERFAMILY SNARE fusion complex 130 197 - -
Mtr8g0657 218 SUPERFAMILY SNARE-like 1 128 IPR011012 -
Mtr8g0657 218 PANTHER BNAA09G47480D PROTEIN 1 218 - -
Mtr8g0657 218 Gene3D Longin domain 1 127 - -
Mtr8g0657 218 CDD Longin 5 127 IPR010908 -
Mtr8g0657 218 Pfam Synaptobrevin 133 213 IPR042855 -
Mtr8g0657 218 Gene3D - 130 214 - -
Mtr8g0657 218 CDD R-SNARE_SEC22 133 196 - -
Mtr8g0657 218 ProSiteProfiles v-SNARE coiled-coil homology domain profile. 135 195 IPR042855 -
Mtr8g0657 218 Pfam Regulated-SNARE-like domain 37 117 IPR010908 -
Mtr8g0657 218 SMART Longin_2 35 119 IPR010908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0657 Mtr-Chr8 7805014 7811865 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0657 46 210 Miscellaneous Gene Families AT5G11150 21.212 1.34e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0657 K08517 - gmx:100795552 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0657 8 7805014 7811865 Mtr8g0657 8 7805014 7811865 ECH