Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0641 ATGAGACCTCCTTTTGTTGGATTCATCAGATTACTTGGCCTTCTTGTTTTTGTTTCAGCTTGCTGTTGCAGTTCTTCTCCCGATGGAAGTACGAACATAGAGAAAACATTAGCGATCATAAAGCCGGATGGATTGCTTGGTAACTACACAGATGATATCAAGAGAACAATTTTAGAATATGGTTTCAGCATTGTCAAGGAAAAGATTGTTCAACTTGATGAGACCACTGTGAAAAGATTTTATGCAGAGCACTCTTCAAAGAACTTCTTTTCCAGCCTTGTTAAATACATGACCAGTGGACCGGTGTTAACCATGGTTTTGGAGAAGGACAATGCTATTGCTGATTGGCGAGCTTTAATGGGCCCGACGGATGCAAGCAAGGCTAAGATTACTCACCCTCACAGCATCAGAGCAAAATGTGGATTAGATACCCAAAAAAATTGTGTTCATGGTTCAGACTCTCCCAAATCTGCACAAAGAGAGATACCATTTTTCTTCAAAGAGCTCTCTCCAGATGTAATTACACAACATGATGAATTGTAG 543 0.4015 MRPPFVGFIRLLGLLVFVSACCCSSSPDGSTNIEKTLAIIKPDGLLGNYTDDIKRTILEYGFSIVKEKIVQLDETTVKRFYAEHSSKNFFSSLVKYMTSGPVLTMVLEKDNAIADWRALMGPTDASKAKITHPHSIRAKCGLDTQKNCVHGSDSPKSAQREIPFFFKELSPDVITQHDEL* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0641 180 ProSitePatterns Nucleoside diphosphate kinases active site. 147 155 IPR023005 -
Mtr8g0641 180 PRINTS Nucleoside diphosphate kinase signature 36 58 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Mtr8g0641 180 PRINTS Nucleoside diphosphate kinase signature 80 99 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Mtr8g0641 180 PRINTS Nucleoside diphosphate kinase signature 100 117 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Mtr8g0641 180 PRINTS Nucleoside diphosphate kinase signature 147 166 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Mtr8g0641 180 SUPERFAMILY Nucleoside diphosphate kinase, NDK 33 169 IPR036850 -
Mtr8g0641 180 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 20 179 - -
Mtr8g0641 180 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 20 179 - -
Mtr8g0641 180 Gene3D - 32 176 IPR036850 -
Mtr8g0641 180 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Mtr8g0641 180 SMART ndk_5 33 172 IPR034907 -
Mtr8g0641 180 Pfam Nucleoside diphosphate kinase 34 168 IPR034907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0641 Mtr-Chr8 7565371 7568854 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0641 K20790 - gmx:100500470 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0641 8 7565371 7568854 Mtr8g0641 8 7565371 7568854 ECH