Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0627 ATGGCCCTAACAAAAGAATTCATGGGTTCTTCATTGGTAGAGAGACCAATATTTCCTTCTTCTTCACCATGTTTTCAACAGAAGAATGGTAGTTTCTTGATCAGTCCTGTTTTTGTTCCTTATGGAAACAAAAGAGTTGTCAGGTTGAGAAAATCTGCAAAGTTCCCTGTTGCAGCTATCAGTGAAGATTTGATGAAAAGCTCTTCTTCATCTTCTTCTATATCATCATCTTCTTCTTCTGTTCCTGCTGAGAAACCAGTGAAATTTAAGGTTAGAGCTGTTGTGACAGTGAGGAACAAGATCAAAGAGGATTTCAAAGAGACTTTTGTGAAACATCTTGATGCTTTTACTGATAGGATTGGACGAAATGTTGTTCTTGAACTTTTTAGCACTGAGATTGATCCAAAAACAAACGCTGCAAAGAAGACCAATGAAGCAGTGTTGAAGGATTGGTCAAAGAAGACTAATATTAAAGCTGAGAGAGTTAATTACACAGCTGAATTTACGGTTGATTCAAATTTTGGAGAACCAGGAGCAATTACTGTGATAAATAATCATCAACAAGAGTTTTACTTAGAAAATATAACAATTGAAGGATTTGCAACTGGAGCATTTCATTTTCCTTGCAATTCTTGGGTTCAAGCCAGAAAAGATCTTCCTGGAAAGAGAATTTTCTTTTCTAATAAGCCTTATCTACCCGATGATACACCTGCTGGGATTAAACTTTTGAGGGAGAAAGACCTGAAAAATCTGAGAGGTGATGGAAAAGGAGTTAGAAAATTATCTGACAGAATTTATGATTATGACACATACAATGATCTTGGAAACCCAGATAGAGGAATTGATCTTGCTAGACCAACTCTTGGCGGATCTGAAATGTATCCATACCCTAGACGGTGTCGTACTGGCCGTGAACCATCTGATACAGATATTACTTGTGAGAGTCGTGTGGAGAAGCCACTTCCTATGTATATACCAAGAGATGAAAGATTTGAGGAATCAAAAATGAACACATTTTCAGTGAAGAGGCTAAAAGGAGTGCTTCATAACTTGCTTCCTGGCCTTAAATCAAGTCTTTCTGCTCAAAACAAAGATTTCAACGAATTCTCAGATGTTGATGGCCTTTATAGTGTTGGACTACTCATTAAGTTAGGTTTGCAAGATGATATTTTGAAGAAACTTCCATTGCCTCACATTGTTAGCAAGATCCAAGAATCCACCAGCCAGGGTATCCTTAAGTATGACATTCCCAAGATTATATCAAAGGATAAATTTGCTTGGTTGAGAGATGATGAATTTGCTCGTCAAGCAATAGCTGGAGTTAATCCTGTTACCATTGAGAGACTTACAGTTTTCCCACCTGTTAGTAAATTAGATCCTGAAATCTATGGTCCACAAGAGTCTGCTCTTAAAAAAGAGCACATTTTAAATCAACTTAATGGCATGACCGTCCAAGAGGCTATAGATCAAAATAAGTTGTTTATAATTGATTATCATGATATCTACCTTCCATTTTTGGAAAGGATCAATGCCTTAGATGGTAGAAAATCATATGCCACACGTACCATATACTACTTGACACCACTTGGTACTCTAAAGCCTGTTGCTATTGAACTTAGCCTGCCTCCATCTGGACCAAATACTCGATCAAAACGTGTAGTTACACCTGCTTTAGATGCTACTACTAATTGGATGTGGATGCTTGCAAAAGCTCATGTTTGCTCCAATGATGCTGGTGTGCACCAACTTGCCCACCATTGGCTACGTACACATGCTTGCATGGAACCATTTATATTGTCTGCTCATAGGCAATTAAGTGCAATGCATCCAATTTTCAAGTTATTGGATCCACACATGAGGTACACTTTGGAGATCAATGCTTTAGCTCGACAGAGCTTGATCAATGCAGATGGTGTCATTGAGTCTTGCTTCACTCCTGGTCGATATGCAATGGAGATTAGTTCTGCTGCTTACAAAACCAACTGGCGTTTTGACCAGGATAGCCTCCCTCAAGATCTCATCCGCAGGGGAATGGCAGTACCTGACCCCACACAACCACATGGGCTAAAGCTAATAATGAAAGATTACCCTTATGCAGAAGATGGTCTTCTAATTTGGTCAGCAATAGAAAATTGGGTTCGCACCTATGTGAACTATTACTACCCAAATCCAAGCCTAATAATCAATGACAGAGAGTTACAAGCTTGGTACTCCGAATCAATCAATGTAGGCCACGCCGATATGAAAGACGAATCATGGTGGCCGAGATTGAACGACAGTGACAATCTTGTCCAAGTCCTAACAATCTTAATTTGGAATGCATCCGCGCAACATGCTGCACTTAATTTTGGACAGTACCCTTATGGAGGTTACGTGCCAAATCGTCCCCCGTTGATGAGAAGATTAATTCCAGAAGAGAATGACCCTGAATATACAAGTTTCATATCTGATCCACAAAAGTATTTTCTCAATGCATTGCCTAGTTTGTTGCAAGCTACAAAATATATGGCTGTTGTGGACACGCTTTCGACTCATTCGTCTGACGAAGAGTATTTAGGTGAGAGGCAACAGCCTTCGATTTGGACGGGTGATGCTGAGATTGTCGAAGCATTTTATCAATTCTCTGCTGAAATTGGAAAGATTGAGAAGGTGATTGATAGTAGGAATTGTGATAGGAATTTGAGGAACCGTTGCGGTGCCGGTGTTTTGCCTTATGAATTACTTGCTCCCAGTTCTGGACCTGGTGTTACATGCAGAGGGGTTCCAAATAGTGTGTCCACATAG 2784 0.3966 MALTKEFMGSSLVERPIFPSSSPCFQQKNGSFLISPVFVPYGNKRVVRLRKSAKFPVAAISEDLMKSSSSSSSISSSSSSVPAEKPVKFKVRAVVTVRNKIKEDFKETFVKHLDAFTDRIGRNVVLELFSTEIDPKTNAAKKTNEAVLKDWSKKTNIKAERVNYTAEFTVDSNFGEPGAITVINNHQQEFYLENITIEGFATGAFHFPCNSWVQARKDLPGKRIFFSNKPYLPDDTPAGIKLLREKDLKNLRGDGKGVRKLSDRIYDYDTYNDLGNPDRGIDLARPTLGGSEMYPYPRRCRTGREPSDTDITCESRVEKPLPMYIPRDERFEESKMNTFSVKRLKGVLHNLLPGLKSSLSAQNKDFNEFSDVDGLYSVGLLIKLGLQDDILKKLPLPHIVSKIQESTSQGILKYDIPKIISKDKFAWLRDDEFARQAIAGVNPVTIERLTVFPPVSKLDPEIYGPQESALKKEHILNQLNGMTVQEAIDQNKLFIIDYHDIYLPFLERINALDGRKSYATRTIYYLTPLGTLKPVAIELSLPPSGPNTRSKRVVTPALDATTNWMWMLAKAHVCSNDAGVHQLAHHWLRTHACMEPFILSAHRQLSAMHPIFKLLDPHMRYTLEINALARQSLINADGVIESCFTPGRYAMEISSAAYKTNWRFDQDSLPQDLIRRGMAVPDPTQPHGLKLIMKDYPYAEDGLLIWSAIENWVRTYVNYYYPNPSLIINDRELQAWYSESINVGHADMKDESWWPRLNDSDNLVQVLTILIWNASAQHAALNFGQYPYGGYVPNRPPLMRRLIPEENDPEYTSFISDPQKYFLNALPSLLQATKYMAVVDTLSTHSSDEEYLGERQQPSIWTGDAEIVEAFYQFSAEIGKIEKVIDSRNCDRNLRNRCGAGVLPYELLAPSSGPGVTCRGVPNSVST* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0627 927 Pfam PLAT/LH2 domain 141 226 IPR001024 GO:0005515
Mtr8g0627 927 Gene3D - 232 334 - -
Mtr8g0627 927 Gene3D - 335 424 IPR027433 -
Mtr8g0627 927 Gene3D - 425 558 - -
Mtr8g0627 927 Gene3D - 560 926 - -
Mtr8g0627 927 PANTHER LIPOXYGENASE 40 926 IPR000907 GO:0016702|GO:0046872
Mtr8g0627 927 SUPERFAMILY Lipoxigenase 233 926 IPR036226 -
Mtr8g0627 927 CDD PLAT_LH2 89 228 IPR042057 -
Mtr8g0627 927 ProSitePatterns Lipoxygenases iron-binding region signature 2. 608 618 IPR020834 GO:0016702|GO:0046872
Mtr8g0627 927 Pfam Lipoxygenase 240 910 IPR013819 GO:0016702|GO:0046872
Mtr8g0627 927 PANTHER LIPOXYGENASE 3, CHLOROPLASTIC 40 926 - -
Mtr8g0627 927 PRINTS Plant lipoxygenase signature 197 215 IPR001246 GO:0016491
Mtr8g0627 927 PRINTS Plant lipoxygenase signature 223 244 IPR001246 GO:0016491
Mtr8g0627 927 PRINTS Plant lipoxygenase signature 262 278 IPR001246 GO:0016491
Mtr8g0627 927 PRINTS Plant lipoxygenase signature 295 314 IPR001246 GO:0016491
Mtr8g0627 927 PRINTS Plant lipoxygenase signature 363 384 IPR001246 GO:0016491
Mtr8g0627 927 PRINTS Plant lipoxygenase signature 412 428 IPR001246 GO:0016491
Mtr8g0627 927 PRINTS Plant lipoxygenase signature 451 470 IPR001246 GO:0016491
Mtr8g0627 927 PRINTS Plant lipoxygenase signature 518 542 IPR001246 GO:0016491
Mtr8g0627 927 PRINTS Plant lipoxygenase signature 839 853 IPR001246 GO:0016491
Mtr8g0627 927 ProSiteProfiles PLAT domain profile. 105 227 IPR001024 GO:0005515
Mtr8g0627 927 ProSitePatterns Lipoxygenases iron-binding region signature 1. 581 595 IPR020833 GO:0016702|GO:0046872
Mtr8g0627 927 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 89 231 IPR036392 GO:0005515
Mtr8g0627 927 PRINTS Lipoxygenase signature 563 580 IPR013819 GO:0016702|GO:0046872
Mtr8g0627 927 PRINTS Lipoxygenase signature 581 598 IPR013819 GO:0016702|GO:0046872
Mtr8g0627 927 PRINTS Lipoxygenase signature 601 621 IPR013819 GO:0016702|GO:0046872
Mtr8g0627 927 Gene3D PLAT/LH2 domain 74 231 - -
Mtr8g0627 927 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 230 927 IPR013819 GO:0016702|GO:0046872
Mtr8g0627 927 SMART LH2_4 89 228 IPR001024 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0627 Mtr-Chr8 7385936 7393215 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0627 1 926 Acyl Lipid Metabolism Gene Families AT1G17420 69.968 0.0 1376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0627 K00454 - gmx:100793614 1562.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0627 8 7385936 7393215 Mtr8g0627 8 7385936 7393215 ECH