Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0622 ATGGCGGTTTCAACTATAGCGTTATACGCGAGTCCACCGAGTAGTGTGTGTTCTACACCGCATCAGATTAACTATGATTTCGAATTAGGATCTAGATCTTCGTCGCCGGCGTCGACGGCTGCGTCGACGTCGGGGAAATCGGTGATGGGTGGTTTATCTTGTTTGTTTTCATCTCCGACGGTGGTGAAGCATGTTCCGTTTACTTCGAGTTTTTCCGGTGGTGGTGGTGGTGATGAAGATGAATTGAAGGAGCTGAGTAGTTCGTTTTCGTATTCATTTTCACCGACCAAGTTTGGTGGATCTTGGAAGAGAGATCATAGTCCAGTTTCGGTTTTTCAGTGTCCTGTTTCGTGTAGTAGTAGCATCGGTGCTGGTACCGGAACGGTTCGATCGGGGAGGGGAAGTACTGGTGGTGGGTTTCTTGATGGGTTTGTTAGAAGTGCTTTGGGTTCTTCTTGTTTGGATTATGATTCTACTGGTGTTAGATTACGCGGTGGTGGTGGTGAATTTGATGGTGTTGGTGGTGATTCTGGAATTGTTGATGAGTTGACTTTTAATTTGGATGATACTTTTGTGGAGGGTTGTGTTGGAATTGAGATTGAGCCTTATGCTAAGAAGTTGTTGATGAATGCTCAGTTAAGACATAAGATCTTTTGTGAAGAGTTTGTTATCAAGGCCTTTTGTGAAGCTGAGAAAGCTCATAGAGGACAGATGCGAGCTAGTGGCGATCCGTATTTGCAGCATTGTTTGGAAACTGCTGTGTTGTTGGCTTTGATCGGTGCGAATTCGACTGTAGTTGCTGCAGGGCTTTTGCATGATACAGTTGATGATGCATTTCTTACTTATGATTATATATATGGGATGTTTGGGGCTGGAGTTGCGGATTTAGTTGAAGGGGTTTCTAAACTGAGTCACTTAAGCAAGCTGGCTCGTGACAATAATACAGCTAGCAAATCTGTTGAAGCTGACCGCCTGCATACGATGTTCCTTGCCATGGCAGATGCAAGAGCTGTCCTCATTAAATTGGCTGATCGATTACATAATATGATGACACTAGATGCATTACCGGTTGCCAAGCAGCAGAGGTTTGCAAAGGAAACTTTGGAGATTTTTGCACCTTTGGCCAACCGCTTAGGAATAGCTAATTGGAAGGACCAATTAGAAAATTTATGTTTTAAGCATCTCAACCCTGTACAGCACAAAGAGCTTTCGTCAAAGCTTGTGGAATCGTATGATGATGCAATGATTGCTTCTGCAATAGAAAGATTAGAGCAAGCACTCAAAGATGAAGGCATTTCTTATCATGTCATTTCTGGGCGGCACAAGAGCTTGTATAGTGTTTATTGCAAAATATTAAAGAAAAAACTAACCATTGATGATATCCATGACATTTATGGGCTGCGCTTGATTGTTGATAAGGAGGAAGACTGTTACAAAGCCTTAAAAGTTGTTCACCGGTTATGGTCTGAAGTGCATGGAAAACTGAAAGATTACATACGTTTCCCCAAGTTCAATGGTTATCAATCTCTGCACACTGTGGTGATGGGTGAAGGCAAGGTTCCCCTTGAAGTACAAGTTCGAACAAAAGATATGCATTTGCAAGCAGAATTTGGATTCGCTGCTCATTGGAGGTACAAGGAAGATCATTGTCAGCTTTCTTCATATGTGCTTCAGATGGTTGAGTGGGCTCGATGGGTTGTCACCTGGCAGTGCGAAGCAATGAGTAAAGATTCCACTTCTGTTGGATATGTCGATTCAATCAAGCCACCTTGCAAGTTCCCTTCTCATGCTGATAACTGTCCATATTCTTACAAGCCTGATTGCGCGCAGGATGGACCTGTGTTTGTTATCATGATTGAGAATGACAAGATGTCTGTCCAAGAATTCTGTGCAAACTCAACAGTACTAGATTTGTTGGAGAGGGTCGGGCGAGCAAGTTGTAGGTTGACAACATATAGGTTCCCTCTGAAGGAAGAATTGAGGCCAAGACTGAATCACAAGCCTGTAAGTGATCCAAATTGCAAGTTGAAGATGGGAGATGTGATCGAGCTTACACCAGCCATACCTGACAAATATCTGACCGAATATAGGGAAGAAATTCAGCGAATGTATGATCGCGGGCTAACTGTATCAAGCATGGGAAGTACTGCTACTGCAAGCAGCATGGTTGGCACTAGTTAA 2181 0.4328 MAVSTIALYASPPSSVCSTPHQINYDFELGSRSSSPASTAASTSGKSVMGGLSCLFSSPTVVKHVPFTSSFSGGGGGDEDELKELSSSFSYSFSPTKFGGSWKRDHSPVSVFQCPVSCSSSIGAGTGTVRSGRGSTGGGFLDGFVRSALGSSCLDYDSTGVRLRGGGGEFDGVGGDSGIVDELTFNLDDTFVEGCVGIEIEPYAKKLLMNAQLRHKIFCEEFVIKAFCEAEKAHRGQMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDTVDDAFLTYDYIYGMFGAGVADLVEGVSKLSHLSKLARDNNTASKSVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPVAKQQRFAKETLEIFAPLANRLGIANWKDQLENLCFKHLNPVQHKELSSKLVESYDDAMIASAIERLEQALKDEGISYHVISGRHKSLYSVYCKILKKKLTIDDIHDIYGLRLIVDKEEDCYKALKVVHRLWSEVHGKLKDYIRFPKFNGYQSLHTVVMGEGKVPLEVQVRTKDMHLQAEFGFAAHWRYKEDHCQLSSYVLQMVEWARWVVTWQCEAMSKDSTSVGYVDSIKPPCKFPSHADNCPYSYKPDCAQDGPVFVIMIENDKMSVQEFCANSTVLDLLERVGRASCRLTTYRFPLKEELRPRLNHKPVSDPNCKLKMGDVIELTPAIPDKYLTEYREEIQRMYDRGLTVSSMGSTATASSMVGTS* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0622 726 ProSiteProfiles S4 RNA-binding domain profile. 663 700 - -
Mtr8g0622 726 SUPERFAMILY Nucleotidyltransferase 386 575 IPR043519 -
Mtr8g0622 726 SUPERFAMILY HD-domain/PDEase-like 205 396 - -
Mtr8g0622 726 CDD NT_Rel-Spo_like 419 537 IPR007685 GO:0015969
Mtr8g0622 726 Gene3D Hypothetical protein af1432 202 396 - -
Mtr8g0622 726 Pfam Region found in RelA / SpoT proteins 439 548 IPR007685 GO:0015969
Mtr8g0622 726 PANTHER - 1 721 - -
Mtr8g0622 726 SMART hd_13 241 358 IPR003607 -
Mtr8g0622 726 PANTHER GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE 1 721 - -
Mtr8g0622 726 Gene3D Beta Polymerase, domain 2 399 529 IPR043519 -
Mtr8g0622 726 SMART RelA_SpoT_2 439 549 IPR007685 GO:0015969
Mtr8g0622 726 Pfam HD domain 230 380 - -
Mtr8g0622 726 CDD HDc 243 371 IPR003607 -
Mtr8g0622 726 ProSiteProfiles HD domain profile. 245 349 IPR006674 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0622 Mtr-Chr8 7315716 7319741 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0622 240 546 EF-hand Containing Proteins AT3G17470 30.606 6.15e-37 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0622 K00951 - gmx:100787301 1134.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0622 8 7315716 7319741 Mtr8g0622 8 7315716 7319741 ECH