Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0615 ATGAAGATGATTCAAATTATTCTTTTCTTTTTAGCTCTTATCTCATATACCTCAAATGCTATTGATTCTGATGATTTCTGTGTAGCAGACTTATCGTTTCCAGACACCCCTTCGGGCTATCCATGCAAGTCGGAAAACAATGTAACAGCTGATGATTTTGTATTCTCTGGCTTAAATATAGCTGCAAACACGTCGACAAACTCTTTTAAAGTTGCATTTACCACTGTAAAAGTCGATAAGATACCAGGTCTCAATGGACTTGGTATCTCTGTAGCAAGAATAGATCTTGGCTTCAATGGAAGTGTACCAATGCACACTCATCCTGGTGTAGGCGAATTTATAATCGTCATTCAAGGTCAAATGACTGCTGGATTTATCACACCTAAAAAAGTTTTTATGAAAACTCTTAATCCTGGTGATGTTTGGGTTTTTCCAACAGGACTTTTGCATTTTATTCTTAACACTGGTCCTGGAAATGCTGTTGCTTATTCTGCATATGCTAGCTCAAATTTCAACACTCATTTAACTGATTTTTTGTTATTTGGTAACAACTTATCAACTTCCACGGTTCAAAAGACTACTTTTGTTGATCCTGCACAAATTATGAAGCTTAAGGTTAATTTTGGTGGTAGTGGCTAG 639 0.3631 MKMIQIILFFLALISYTSNAIDSDDFCVADLSFPDTPSGYPCKSENNVTADDFVFSGLNIAANTSTNSFKVAFTTVKVDKIPGLNGLGISVARIDLGFNGSVPMHTHPGVGEFIIVIQGQMTAGFITPKKVFMKTLNPGDVWVFPTGLLHFILNTGPGNAVAYSAYASSNFNTHLTDFLLFGNNLSTSTVQKTTFVDPAQIMKLKVNFGGSG* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0615 212 SUPERFAMILY RmlC-like cupins 25 208 IPR011051 -
Mtr8g0615 212 Pfam Cupin 61 200 IPR006045 -
Mtr8g0615 212 Gene3D Jelly Rolls 21 212 IPR014710 -
Mtr8g0615 212 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1 7 207 - -
Mtr8g0615 212 PRINTS Germin signature 105 125 IPR001929 GO:0030145
Mtr8g0615 212 PRINTS Germin signature 134 154 IPR001929 GO:0030145
Mtr8g0615 212 PRINTS Germin signature 167 182 IPR001929 GO:0030145
Mtr8g0615 212 CDD cupin_OxOx 24 208 - -
Mtr8g0615 212 SMART Cupin_1_3 58 202 IPR006045 -
Mtr8g0615 212 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 7 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0615 Mtr-Chr8 7273903 7274930 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0615 1 211 Miscellaneous Gene Families AT5G20630 49.528 4.61e-63 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0615 - - mtr:MTR_8g020750 276.559