Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0608 ATGAAGATTACTCCTATACTTTTCCTTTTCACTCTCCTCTCATCCACCACTTCCTATGCTTCTGTTCATGATTTTTGTGTAGGAGATATAAAAGCTCCAGAAACACCTACAGGCTATCACTGCATGCCTCTTGCAAACATCACATCGGACGATTTCGTCTTTCACGGCTTTGTAGCCGGAAACACTAACAACTCTTTCAACGCTGCACTTACCTCGGCGTTTGTCACCGATTTTCCAGCTCTTAACGATCTTGGAATCTCCGCGGCGCGGTTAGACATAGCAAAAGGCGGATCTATTCCAATGCATACTCATCCTGGCGCTACCGAATTATTGATTATGGTTCATGGTGAAATAACTGCTGGGTTTCTAACAACTACTGCAGTTTATTCAAAAACGTTGAAACCGGGTGATCTTATGGTTTTTCCCCAAGGGATGTTGCATTTTCAAGTTAATTCTGGTAAGGGAAAAGCTACTGCTTTTCTTACTTTTAGTAGTGCAAATCCTGGTGCTCAATTACTTGATCTTCTTTTGTTTTCCAATAATTTACCTTCTGAGTTAGTGGCACAAACTACTTTTCTTGATCTTGCTCAAGTGAAGAAGCTAAAGGCTCGGTTTGGTGGAAGAGGTTAG 630 0.4159 MKITPILFLFTLLSSTTSYASVHDFCVGDIKAPETPTGYHCMPLANITSDDFVFHGFVAGNTNNSFNAALTSAFVTDFPALNDLGISAARLDIAKGGSIPMHTHPGATELLIMVHGEITAGFLTTTAVYSKTLKPGDLMVFPQGMLHFQVNSGKGKATAFLTFSSANPGAQLLDLLLFSNNLPSELVAQTTFLDLAQVKKLKARFGGRG* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0608 209 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1 7 205 - -
Mtr8g0608 209 SUPERFAMILY RmlC-like cupins 51 206 IPR011051 -
Mtr8g0608 209 ProSitePatterns Germin family signature. 97 110 IPR019780 GO:0030145
Mtr8g0608 209 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 7 205 - -
Mtr8g0608 209 SMART Cupin_1_3 55 199 IPR006045 -
Mtr8g0608 209 PRINTS Germin signature 102 122 IPR001929 GO:0030145
Mtr8g0608 209 PRINTS Germin signature 131 151 IPR001929 GO:0030145
Mtr8g0608 209 PRINTS Germin signature 164 179 IPR001929 GO:0030145
Mtr8g0608 209 Gene3D Jelly Rolls 19 208 IPR014710 -
Mtr8g0608 209 CDD cupin_OxOx 22 205 - -
Mtr8g0608 209 Pfam Cupin 58 198 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0608 Mtr-Chr8 7236026 7236998 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0608 20 209 Miscellaneous Gene Families AT1G72610 58.854 5.70e-77 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0608 - - gmx:100527498 320.857