Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0607 ATGAAGATTATTCACATAGTTTTTCTTTTCTTTTTTCTTTCATTCACTACTTCCCAAGCTTCTGTCAATGATTTTTGTGTAGCAGATTTAAAGGCTCCAGATACCCCTTCAGGCTATCAGTGCAAACCCCTAGCAAATATCACATCAGACGATTTTGTCTTTCATGGCTTCGTAGCCGGAAACACCAACAACTCTTTCAACGCTGCACTTACCTCCGCATTCGTCACTGAATTTCCAGGCCTTAACGGACTAGGAATCTCAGCAGCGCGGTTAGACATAGCCGAAAATGGTTCAATTCCAATGCATACTCATCCCGGTGCTACCGAATTATTGATAATAGTTCAAGGTGAAATAACCGCTGGATTTCTGACACCTACCTCAGTTTATTCTAAGACGTTGAAACCGGGTGATCTTATGGTTTTTCCACAGGGGATGTTGCATTTTCAAATTAACACTGGTAAGGGAAAAGCTACTGCTTTTCTTACATTTAGTAGTGCTAACCCTGGTGCTCAATTACTTGATCTTCTTTTGTTTTCGAATAATTTACCTTCTGAATTGGTGGCACAAACTACTTTCCTTGATCTTGCACAAGTGCAGAAGCTAAAGGCACGTTTTGGTGGAAGAGGGTAG 630 0.4095 MKIIHIVFLFFFLSFTTSQASVNDFCVADLKAPDTPSGYQCKPLANITSDDFVFHGFVAGNTNNSFNAALTSAFVTEFPGLNGLGISAARLDIAENGSIPMHTHPGATELLIIVQGEITAGFLTPTSVYSKTLKPGDLMVFPQGMLHFQINTGKGKATAFLTFSSANPGAQLLDLLLFSNNLPSELVAQTTFLDLAQVQKLKARFGGRG* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0607 209 SMART Cupin_1_3 55 199 IPR006045 -
Mtr8g0607 209 Gene3D Jelly Rolls 18 208 IPR014710 -
Mtr8g0607 209 ProSitePatterns Germin family signature. 97 110 IPR019780 GO:0030145
Mtr8g0607 209 PRINTS Germin signature 102 122 IPR001929 GO:0030145
Mtr8g0607 209 PRINTS Germin signature 131 151 IPR001929 GO:0030145
Mtr8g0607 209 PRINTS Germin signature 164 179 IPR001929 GO:0030145
Mtr8g0607 209 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1 7 205 - -
Mtr8g0607 209 Pfam Cupin 58 198 IPR006045 -
Mtr8g0607 209 SUPERFAMILY RmlC-like cupins 23 206 IPR011051 -
Mtr8g0607 209 CDD cupin_OxOx 22 205 - -
Mtr8g0607 209 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 7 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0607 Mtr-Chr8 7231789 7232666 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0607 19 209 Miscellaneous Gene Families AT1G72610 59.585 1.95e-78 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0607 - - gmx:100783206 328.176