Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0604 ATGATTTTCATTATTTTCCTCTTAACCCTTCTCTCACATTCCACAACCAATGCTTCTGTACTAGACTTCTGTGTAGCAGATTTATCTTCTTCACAAACTCCTTCAGGCTACCCTTGCAAAAAATCAGTAACAATCAATGACTTTGTTTACTCCAACTTCAATTCAGGAAACACTTCAACAAATTTTTTCAAATTTTCAATAACTCCTGCATTTGTTAATCAATTTCCAGCTGTTAATGGTCTTGGTTTATCAGCAGCAAAATTAGACCTAGACGTTGGAGGTATAATACCAATGCATTCACATCGCGGCGCTTCGGAGTTAATGATTGTAGTACAAGGTCGTATAACTGCTGGTTTTATTTCTTCTGATAATACTGTTTTTATCAAGACACTTTCAAAAGGTCAAATTTTGGTTCTTCCACAAGGTTTGTTGCATTTTCAATATAATGCTGGAAGGAATAAAGCTTCTGCTTATCTTACTTTTAGTAGTGAAAACCCTGGTTCACAAGTTCTTGATCTTGCTTTGTTTGGAAATAATTTGAGTTCTGCTAATTTGATAAAGAGCACTTTGCTTGATCCTGCTCAAGTTAAAAAGCTTAAGGCTATTTTTGGTGGGAGTGGCTAG 624 0.3542 MIFIIFLLTLLSHSTTNASVLDFCVADLSSSQTPSGYPCKKSVTINDFVYSNFNSGNTSTNFFKFSITPAFVNQFPAVNGLGLSAAKLDLDVGGIIPMHSHRGASELMIVVQGRITAGFISSDNTVFIKTLSKGQILVLPQGLLHFQYNAGRNKASAYLTFSSENPGSQVLDLALFGNNLSSANLIKSTLLDPAQVKKLKAIFGGSG* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0604 207 CDD cupin_OxOx 18 203 - -
Mtr8g0604 207 PRINTS Germin signature 99 119 IPR001929 GO:0030145
Mtr8g0604 207 PRINTS Germin signature 129 149 IPR001929 GO:0030145
Mtr8g0604 207 PRINTS Germin signature 162 177 IPR001929 GO:0030145
Mtr8g0604 207 Pfam Cupin 63 195 IPR006045 -
Mtr8g0604 207 Gene3D Jelly Rolls 17 207 IPR014710 -
Mtr8g0604 207 SMART Cupin_1_3 51 197 IPR006045 -
Mtr8g0604 207 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 5 203 - -
Mtr8g0604 207 SUPERFAMILY RmlC-like cupins 20 200 IPR011051 -
Mtr8g0604 207 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1 5 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0604 Mtr-Chr8 7214984 7215802 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0604 17 207 Miscellaneous Gene Families AT1G72610 53.886 2.64e-75 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0604 - - lja:Lj3g3v2590370.1 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0604 8 7214984 7215802 Mtr8g0604 8 7214984 7215802 ECH