Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0597 ATGGCTACACCACCATCAACAATGGCGCAAAACATGATCAGTTCACAACAATCCACAATTGACACACAAACTCAAAACCCCATTTCTTCAAACCCTACAATCCCATCTCCTTCACCAATTCCCCAACAGTTACCTGCCATCATCAATCTTAACCCTAGCCCTAACCCTAATGTTCCCAGTTTTCAAATTCAACCTCTGCAGCAGCAAGTTGCGGTGCAGCAAGCCGGACTTTACGGTGGGCTGATGAATTTCGGTGGATCAGCTGCTGTTCCTGATCAGCAACAGCAATTATCTGGAAGTGTCGGTGTTGGCGTCGGAGGCAACGCCTCTAACTTGTCTGGTGCTGGAGCAACTCAGTTTAACCTGTTAACCTCGCCGGGACAGAAAGTTGGTTTGGTGCAAACCTCACAACTTTCTTCTGCGAATTCTGCTGGACAGTCACTGCAAGGAATGCAACAAGCCATTGGGACGTTGGGGTCGTCCAATCTAGCTTCTCAACTGATGACTACTAATAGATCTCTTTATGGTCAGAAGCAGCAGCTCGCGCAACAGGCTTCACTTAACAATCAACAGGCTCAGCAACAGCAATTAGCCGGAGGCGTCGGTGTTTGCATTGGCAGCGGTGCTTTCAATTTTGGAGGGTCAGCTGTTGTTACTGCTCAGCAACAACAATTAGCCGGAGGCGTTGGTCTTGGCATTGGAGGCAACACCTCTAGCTTGTCACAGTCGGCGTTAGCTGGACCGAGTGGTCCCTTCCCCAAGTTGTCTGGTGCCAGTGCAACACAGTCTAACCAATTAACCTCGCCGGGGCTGCAAGTTGGTTTGGTGCAATCCTCGCAATTTTCTTCGGGGAATTCTGCTGGACAGTCACTGCAAGGAACACAACAAGCCATTGGGACCATGGGGTCGTCCAATCTAGCCTCTCAACTGATGACGACTAATGGAGCTCTTTATGCTCAGCAGCTGCAACTCTCACAGCAGGCTCCGTTTAACAATCAACAGTTGGTTGGGTTGCCTCAGAGTGGACAGCCTGCCATGATACAGAATCAGTTGCTTAAGCAAATACCAGCAGTGTCTGGCTCTGCCTCCTTGTTGCCCCTTCAACAACCTCAGAGTCAGCAACAGCTGGCTTCATCTGCTCAACTTCAACAAAGCTCTTTGACCCTGAACCAACAGCAATTGCCTCAGTTGATGCAGCAGCCGAAACCCATGGGGCAACCGCAGCTTCAGCAGCAGCTACAACATCAACAACTTCTACAGCAGCAGCTACAGCTACAACAACAATATCAGAGGCTGCAACAACAGCTGGCTTCATCTGCTCAACTGCAACAAAACTCTTTGACCCTCAACCAACAGCAATTGCCCTTGTTGATGCAGCAGCCGAAATCCATGGGGCAACCTCTGCTTCAGCAGCAGCAGCAACAACTTCTACAGCAGCAGCTACAGTTACAACAACAATATCAGAGGTTGCAACAACAGCTAGCTTCATCTGCTCAACTGCAACAAAACTCTTCGACCCTGAACCAATTGCCCCAGTTGATGCAGCAGCAGAAATCCATGGGGCAACCTCTGCTTCAGCAGCAGCTACAACAACAACAACTTCTACTGCAGCAGCAACAACTAGTTCTACAACAGCAGCAGCAGCAACAGCAACAACAACGAACTCAACTTCTGCAGCAGCAGATGCAGGCTCTGAGGATTCCAGGACCTGCAGGTCATAAGTCACTAAGTTTAACAGGATCTCAGCCTGAGGCTACTGCATTTGGCATGACCACACCTGGCGGAAGTTTAAGTCAAGGAACCAGAACAAATGCCATGTTTGGACAAACTGAAATCATGTCTGTTGTGAATGAATTGAAAGAAACAAGAAAGGAAGTCAAGGCTATTATCAAGATCCTGCTGAGGTTTTTCAAGGTCATTTCCATTGTTATGGCTTTGTTCATTTTCGTAACTCTTTTTGTTGTTTTAATCAAGCCTTCTTCTTCCTCCAATCCAATGGCGGAAAACGTAATTGGTTCACCGGATTCTCAAATTCAGAACCCCTCTTCTTCAAACCCTTCAATCCCATCTCCTTCACCAATCTCTCAACAACAACAATCTCCTTCAATTCACATGTCAAATTCATCACCATCTCTCTCTCAAGATCAACAACAGTTACACACCATCAATACCATTAACCCTAACTCCAATTTTCAACTTCAACAAACGCTACAACGTTCTCCTTCTATGTCCCGCCTTAATCAAATTCAACCTCAGCAGCAGCAGCAAGTTGTTGCCAGGCAGCAAGCTGCACTTTATGGTGGGCAGATGAATTTTGGAGGATCAGCTGCTGTCTCTGCTCAGCAACAGCAATTAAGCGGCGGCGTTGCTGCCATGGGTGGCAGTGCTTCCAATTTGTCGCGATCGGCGTTGATTGGACAGAGTGGTCATTTTCCTATGTTGTCTGGTGCTGGAGCTGCACAGTTTAACCTATTAACCTCGCCGAGGCAAAAAGGTGGGATGGTGCAATCCTCACAATTTTCTTCGGCGAATTCTGCTGGACAATCACTGCAAGGAATGCAACAAGCTATTGGGATGATGGGGTCGCCCAATCTAGCCTCTCAAATGAGGACCAATGGAGGTCTTTACACTCAGCAGCAGCAGATTCGATTGACTCCAGCCCAAATGAGGCAGCAGCTCTCACAGCAGGCACTTAACAGTCAACAGGTTCAAGGTATACCAAGGTCATCATCCCTTGCTTTTATGAATTCTCAGTTGTCTGGGTTGTCTCAGAATGGGCAGCCTGGCATGATGCATAACTCTTTAACACAGAGTCAGTGGCTTAAGCAAATGCCAGCAATGTCTGGCCCTGCCTCCCCGCTGCGTCTTCAACAACATCAGAGGCAGCAACAGCAGCTGGCTTCATCTGGTCAACTGCAACAAAACTCTATGACCCTGAACCAACAGCAATTGTCCCAGTTTATGCAGCAGCAGAAATCCATGGGGCAACCTCAGCTTCATCAGCAGCAGCCATCCCCTCAGCAGCAGCAGCAACAACAACTTCTACAGCCACAACAACAATCTCAACTACAAGCATCTGTTCATCAACAGCAACATCTGCACTCTCCTAGGGTGGCAGGACCTACAGGTCAAAAGTCAATAAGTTTAACAGGATCGCAGCCAGATGCTACTGCATCTGGTGCGACCACACCTGGCGGAAGTTCAAGTCAAGGAACTGAAGCAGCTACAAACCAAGTACTTGGAAAGAGAAAAATACAGGATTTAGTTGCACAGGTGGATCCACAGGGTAAGCTGGACCCTGAAGTTATAGATCTTCTTTTAGAGTTTGCCGATGACTTCATTGATTCTGTAACTACACACGGTTGTATTTTGGCAAAACATAGAAAATCATCAACTTTGGAGTCCAAGGATTTATTGCTACACCTAGAGAAAAATTGGGATTTGACAATTCCTGGATATTCAAGTGAAGAGAAGAAGTACCAGAGTAGACCTCTCTCCAATGAGCTTCACAAGAGACGGCTAGATGCGGTTCGCATGTTGATGGAATCCTCTTCAGTCCCGGAATCAATTGTTAACAATTCTAAAGATATCAGTAGACAGGGCCATCCCAACCCTGCAGGTTCCCATCATCTAATGAGACCCCTGAGTTCAGACCAGCTGGTTTCTCATTCAACTAGTTCTCAAATGCTACAGCAGATGACAAGGTTTTAG 3711 0.4732 MATPPSTMAQNMISSQQSTIDTQTQNPISSNPTIPSPSPIPQQLPAIINLNPSPNPNVPSFQIQPLQQQVAVQQAGLYGGLMNFGGSAAVPDQQQQLSGSVGVGVGGNASNLSGAGATQFNLLTSPGQKVGLVQTSQLSSANSAGQSLQGMQQAIGTLGSSNLASQLMTTNRSLYGQKQQLAQQASLNNQQAQQQQLAGGVGVCIGSGAFNFGGSAVVTAQQQQLAGGVGLGIGGNTSSLSQSALAGPSGPFPKLSGASATQSNQLTSPGLQVGLVQSSQFSSGNSAGQSLQGTQQAIGTMGSSNLASQLMTTNGALYAQQLQLSQQAPFNNQQLVGLPQSGQPAMIQNQLLKQIPAVSGSASLLPLQQPQSQQQLASSAQLQQSSLTLNQQQLPQLMQQPKPMGQPQLQQQLQHQQLLQQQLQLQQQYQRLQQQLASSAQLQQNSLTLNQQQLPLLMQQPKSMGQPLLQQQQQQLLQQQLQLQQQYQRLQQQLASSAQLQQNSSTLNQLPQLMQQQKSMGQPLLQQQLQQQQLLLQQQQLVLQQQQQQQQQQRTQLLQQQMQALRIPGPAGHKSLSLTGSQPEATAFGMTTPGGSLSQGTRTNAMFGQTEIMSVVNELKETRKEVKAIIKILLRFFKVISIVMALFIFVTLFVVLIKPSSSSNPMAENVIGSPDSQIQNPSSSNPSIPSPSPISQQQQSPSIHMSNSSPSLSQDQQQLHTINTINPNSNFQLQQTLQRSPSMSRLNQIQPQQQQQVVARQQAALYGGQMNFGGSAAVSAQQQQLSGGVAAMGGSASNLSRSALIGQSGHFPMLSGAGAAQFNLLTSPRQKGGMVQSSQFSSANSAGQSLQGMQQAIGMMGSPNLASQMRTNGGLYTQQQQIRLTPAQMRQQLSQQALNSQQVQGIPRSSSLAFMNSQLSGLSQNGQPGMMHNSLTQSQWLKQMPAMSGPASPLRLQQHQRQQQQLASSGQLQQNSMTLNQQQLSQFMQQQKSMGQPQLHQQQPSPQQQQQQQLLQPQQQSQLQASVHQQQHLHSPRVAGPTGQKSISLTGSQPDATASGATTPGGSSSQGTEAATNQVLGKRKIQDLVAQVDPQGKLDPEVIDLLLEFADDFIDSVTTHGCILAKHRKSSTLESKDLLLHLEKNWDLTIPGYSSEEKKYQSRPLSNELHKRRLDAVRMLMESSSVPESIVNNSKDISRQGHPNPAGSHHLMRPLSSDQLVSHSTSSQMLQQMTRF* 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0597 1236 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B 208 432 - -
Mtr8g0597 1236 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B 63 197 - -
Mtr8g0597 1236 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B 531 612 - -
Mtr8g0597 1236 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B 663 1235 - -
Mtr8g0597 1236 MobiDBLite consensus disorder prediction 953 974 - -
Mtr8g0597 1236 SUPERFAMILY Histone-fold 1078 1149 IPR009072 GO:0046982
Mtr8g0597 1236 MobiDBLite consensus disorder prediction 986 1078 - -
Mtr8g0597 1236 Coils Coil 175 195 - -
Mtr8g0597 1236 MobiDBLite consensus disorder prediction 664 717 - -
Mtr8g0597 1236 MobiDBLite consensus disorder prediction 1193 1212 - -
Mtr8g0597 1236 Pfam Transcription initiation factor TFIID subunit A 1081 1148 IPR003228 GO:0005669|GO:0006352
Mtr8g0597 1236 Gene3D Histone, subunit A 1075 1150 IPR009072 GO:0046982
Mtr8g0597 1236 MobiDBLite consensus disorder prediction 1 31 - -
Mtr8g0597 1236 Coils Coil 529 563 - -
Mtr8g0597 1236 MobiDBLite consensus disorder prediction 945 974 - -
Mtr8g0597 1236 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 63 197 IPR037794 GO:0000124|GO:0005669|GO:0046695
Mtr8g0597 1236 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 663 1235 IPR037794 GO:0000124|GO:0005669|GO:0046695
Mtr8g0597 1236 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 208 432 IPR037794 GO:0000124|GO:0005669|GO:0046695
Mtr8g0597 1236 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 531 612 IPR037794 GO:0000124|GO:0005669|GO:0046695
Mtr8g0597 1236 MobiDBLite consensus disorder prediction 1 44 - -
Mtr8g0597 1236 Coils Coil 415 442 - -
Mtr8g0597 1236 CDD TAF12 1080 1148 IPR003228 GO:0005669|GO:0006352
Mtr8g0597 1236 Coils Coil 469 500 - -
Mtr8g0597 1236 MobiDBLite consensus disorder prediction 242 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0597 Mtr-Chr8 7130536 7142922 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0597 K03126 - gmx:100783017 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0597 8 7130536 7142922 Mtr8g0597 8 7130536 7142922 ECH