Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0593 ATGGGTTCCGGAGGAAGACCGTTATTTGATTTTGACCTCAACGAGCCACCTACAGAAGATAATGATGAGAAGGATAGTGTTTTCTGCTTCCAGCCCCAAAAGACCCAACCATCAACAAATTCCCATTCTTCAGACTTACTTGTAGCTTCTACTGCTGCTCAAGGAATAATGAATAATCACGCATTTTCTCATGCCTCAACCGTCTCGGGATTTCAACCTTTTATTCGTTCTAAATCTGCAAGTGTCCCTGGCGCGGATTCTGATCTTAAGAATGCAGGAGATTCGGGTGCAAAGTCCTCCTCTAAGTTCATTAAAGACGAGGATGTTAAAGTTAAGGAATCACACATATCTGGCTTGACAAAAGCACAATCTACAGAAAGGGAAGAGGGTGAGTGGTCTGACGATGAGGGTTTTGCTGATGCAAATGGAGGTAATAATCCGCCGCAACAAAGTCATGCTCCAGAAGAACAAACAACATCTGTAGCAGTGAATGGAAGTTCTGCAGTGGCTTCTGACAGTAAGTCTAGCAATATCAAGAGTTCTAATTCTAATAGTTTAAATGATGAAAAGAATAGCCGTGCTTCTATAGGTCTAGAATCAGATAGTAGTGAACAAAAAAACAATGGTATCCCAAATTCAGAAAGCAATGTAAAAAGTGAAGCTTCTATTGATGCACAGGAGGAACCTGGTTTAGTTCCCAAGCAAAAAGAGGTGAAGGGTATTGAAGCAAGTCATGCAATTAGGGCTGCAAATATTCCTGGGAAGAGGAAGATTGACCAACAGAAAGAGAAAATGTTGGGAAAGAAACGTACTAGACAGACCATGTTTCTTAACTTGGAAGATGTCAAGCAAGCAGGTCCTATTAAAACCTCAACCCCAAGAAGACAGGCTTTCACATCGCCAGTTATAAGTCGTACCGTGAAGGAAGTTCGTACTATTCCTGCACAAGTTGAACGTGCTGGAATAGCTAAGGATCCGAATCTTGTTGACTCTTCTTCTGGTGAAGGTGTAAGTCAAATTGAAACACATGAACCTAAATCTGATTGTAATGGTGATAATTCTATACAATTTGGTAGGTCTAGGAGGATAAACAGTGAGGCAGAACCTCCTATAGAGGCCAATTTACCACCCATACCAAGGCAGGGGTCATGGAAACAACAGACAGATTTGAGGCAGCAGAAGAATGCATTTGTTTCTAATAGGAAGTCGGGACAGAGTGGTCAAAGCTCTAATGATGTTAGACTGGGAAACAAGAAATATCCTTCTATCAAGAAGCAAGCTCCTGTCAGTTTTCAGTCCCAGGACTCATCGGTTGAACGCCTCATACGGGAGGTAACCAGTGAAAAGTTTTGGCACCACCCAGGAGAGACCGATTTAAAGTGTGTTCCTGGAAAGTTTGAATCAGTGGAAGAGTATGTTCGAGTATTTGAGCCTTTGCTTTTTGAGGAATGCCGTGCTCAACTTTACAGTACTTGGGAAGAATCAACAGAAACAGTGTCAAGGGATACTCATATTATGGTGCGGGTGAAGGCAAATGAGTCAAGAGAAAGAGGTTGGTATGATGTGAAATTACTTCCAGCACATGAGTTCAAATGGTCATTTAAGGAGGGCGATGTTGCAATTCTTTCAACCCCTAGGCCTGGATCAGTCAGATCCAAGCAGAACAATTCATCTTTAGGTCACGATAGCGGGGAATCAGAAATCACTGGACGTGTGGTTGGTACAGTTAGGCGACACATACCCATTGATACCCGCGATCCTCCTGGTGCAATACTCCATTACTATGTGGGGGATTCTTATGATCCCAGCAGGGGTGACGATGATCATATCGTACGGAAACTTCAAACTGGAAGCATCTGGTATCTCACAGTCCTTGGTTCTCTTGCTACTACACAGAGAGAATATGTTGCTCTGCATGCATTTCGTCGCTTAAACATGCAGATGCAAAGTGCAATTCTGCAGCCTAGTCCTGAACACTTCCCGAAATATGAGCAGCAGACCCCGGCAATGCCTGAATGCTTCACGCCAAACTTTACCGAGTATCTGCGCAGGACCTTTAACGAACCCCAGTTGGCTGCAATCCAATGGGCAGCTATGCATACAGCTGCTGGTACAAGTAGTGTGGCAACAAAGAGGCAAGAACCTTGGCCTTTTACTCTTGTTCAAGGACCTCCAGGAACAGGAAAAACACATACAGTATGGGGAATGTTGAATGTCATTCACCTTGTGCAGTATCAACACTACTACACCTCTTTGCTTAAGCATGTAGCTCCTGAAAGCTACAAGCAAGCTAATGAGCTCAATTCAGATAATGCCCCTACAGGGTCCATCGATGAAGTTCTTCAAAACATGGACCAAAATCTCTTACGAACTTTGCCTAAACTAGTCCCAAAGCCTAGAATGTTGGTATGTGCTCCTTCTAATGCTGCCACTGATGAGCTTCTTTCCCGTGTCCTTGATCGTGGATTTATTGATGGAGAGATGAAAGTATATCGACCTGATGTAGCACGGGTTGGGGTTGATTCTCAGACACGTGCTGCCCAAGCAGTTTCTGTGGAGCGGAGAACTGAACAACTTTTAGTCAAGACTCGGGAGGAAGTTATGGGATGGATGCAACAGTTGAGGAATCGTGAAGCACAGTATACTCAACAGTTGCACTGTCTTCATAGAGAACTGAATGCTACTGCTGCTGCTGTTCGTTCCCAAGGATCTGTCGGCGTTGACCCCGACCTTCTCATGGCCCGTGATCAGAATCGGGATGTTTTGCTACAGAACCTTGCCTCTGTAGTCGAAGGCAGGGATAAGGTTCTGGTCGAGATGTCCCGCCTTGCTGTTTTGGAAGGTAGGTTTCGACCTGGCAGTGGTTTCAATTTGGAAGAGGCCCGTGCTAGTCTGGAGGCCAGTTTTGCCAATGAAGCTGAAATAGTTTTCACTACTGTTTCTAGCAGTGGCCGCAAGTTGTTTTCTCGTCTTTCCCATGGATTTGATATGGTAGTAATTGACGAGGCAGCCCAAGCCAGTGAGGTGGGAGTTCTTCCTCCCCTTTCTCTTGGGGCAGCACGATGTGTTCTTGTTGGAGATCCTCAACAGCTTCCTGCTACAGTTATCAGCAAGGCTGCAGGAACCTTGATGTACAGCAGGAGTCTTTTTGAAAGGTTCCAACAAGCAGGATGCCCAACAATGTTGTTGTCTGTTCAATATAGAATGCATCCCCAAATTAGGGATTTCCCTTCTAGGTACTTTTATCAGGGGCGCCTTAGTGACAGTGAAAGTGTGATTAAATTGCCTGACGAAGCATACTATAAAGACCCTTTACTTAGACCTTATATATTCTATGACATCAGACATGGGCGGGAGTCTCACAGAGGTGGATCAGTCTCCTACCAAAACATACACGAAGCACAATTTTGTCTCCGATTGTATGAGCATATTCAGAAAACAGTGAAATCTTTGGGTCTGCCAAAGATTTCTGTTGGCATAATTACTCCTTACAAGCTGCAGTTGAAATGCCTCCAACGTGAGTTTGAGGAAGTCTTAAATTCAGAAGAAGGGAAGGATATATATATCAACACAGTAGATGCTTTCCAAGGTCAAGAGCGTGATGTGATCATAATGTCTTGTGTGCGTGCATCGACTCATGGGGTTGGTTTCGTTGCTGATATACGTCGAATGAATGTTGCCCTTACACGTGCAAGAAGGGCCCTTTGGGTGATGGGAAATGCAAATGCTCTGATACAATCCGAAGATTGGGCTGCATTGATTGCAGATGCAAGATCCCGAAATTGCTACATGGACATGGATTCTATTCCCAAGGACTTTCTGGTGACCAAGGGACCTGTTTACACACCATTGCCCGGTAAACCACCCTCAAATATGAGGGGAATAAGATCAGGCGGGCCAAGATATAATAGATCAATGGAGATGCATACGGAATCCAGGGTGGGAGCACCATCTGAAGATGATGAGAGGATGAATGGCGCTTCAGCAAGCTCCAGAAATGGGAACCATCGTCCATCAAGGTATTTAACCGAGAACTCCTTGGATGATTCCAGAGATGCTTGGCAGCATGGCAATCAGAAGAGGCAAGGTTCAACTGGAACCATGGCAAAGAGAGACGTATAG 4122 0.4464 MGSGGRPLFDFDLNEPPTEDNDEKDSVFCFQPQKTQPSTNSHSSDLLVASTAAQGIMNNHAFSHASTVSGFQPFIRSKSASVPGADSDLKNAGDSGAKSSSKFIKDEDVKVKESHISGLTKAQSTEREEGEWSDDEGFADANGGNNPPQQSHAPEEQTTSVAVNGSSAVASDSKSSNIKSSNSNSLNDEKNSRASIGLESDSSEQKNNGIPNSESNVKSEASIDAQEEPGLVPKQKEVKGIEASHAIRAANIPGKRKIDQQKEKMLGKKRTRQTMFLNLEDVKQAGPIKTSTPRRQAFTSPVISRTVKEVRTIPAQVERAGIAKDPNLVDSSSGEGVSQIETHEPKSDCNGDNSIQFGRSRRINSEAEPPIEANLPPIPRQGSWKQQTDLRQQKNAFVSNRKSGQSGQSSNDVRLGNKKYPSIKKQAPVSFQSQDSSVERLIREVTSEKFWHHPGETDLKCVPGKFESVEEYVRVFEPLLFEECRAQLYSTWEESTETVSRDTHIMVRVKANESRERGWYDVKLLPAHEFKWSFKEGDVAILSTPRPGSVRSKQNNSSLGHDSGESEITGRVVGTVRRHIPIDTRDPPGAILHYYVGDSYDPSRGDDDHIVRKLQTGSIWYLTVLGSLATTQREYVALHAFRRLNMQMQSAILQPSPEHFPKYEQQTPAMPECFTPNFTEYLRRTFNEPQLAAIQWAAMHTAAGTSSVATKRQEPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYTSLLKHVAPESYKQANELNSDNAPTGSIDEVLQNMDQNLLRTLPKLVPKPRMLVCAPSNAATDELLSRVLDRGFIDGEMKVYRPDVARVGVDSQTRAAQAVSVERRTEQLLVKTREEVMGWMQQLRNREAQYTQQLHCLHRELNATAAAVRSQGSVGVDPDLLMARDQNRDVLLQNLASVVEGRDKVLVEMSRLAVLEGRFRPGSGFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVGVLPPLSLGAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSRYFYQGRLSDSESVIKLPDEAYYKDPLLRPYIFYDIRHGRESHRGGSVSYQNIHEAQFCLRLYEHIQKTVKSLGLPKISVGIITPYKLQLKCLQREFEEVLNSEEGKDIYINTVDAFQGQERDVIIMSCVRASTHGVGFVADIRRMNVALTRARRALWVMGNANALIQSEDWAALIADARSRNCYMDMDSIPKDFLVTKGPVYTPLPGKPPSNMRGIRSGGPRYNRSMEMHTESRVGAPSEDDERMNGASASSRNGNHRPSRYLTENSLDDSRDAWQHGNQKRQGSTGTMAKRDV* 1374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0593 1373 MobiDBLite consensus disorder prediction 545 570 - -
Mtr8g0593 1373 Gene3D - 1067 1273 IPR027417 -
Mtr8g0593 1373 MobiDBLite consensus disorder prediction 1 25 - -
Mtr8g0593 1373 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN-RELATED 1 1340 - -
Mtr8g0593 1373 MobiDBLite consensus disorder prediction 255 272 - -
Mtr8g0593 1373 Pfam AAA domain 692 1038 IPR041677 GO:0004386
Mtr8g0593 1373 MobiDBLite consensus disorder prediction 321 416 - -
Mtr8g0593 1373 MobiDBLite consensus disorder prediction 547 564 - -
Mtr8g0593 1373 CDD SF1_C_Upf1 1069 1258 IPR041679 -
Mtr8g0593 1373 PANTHER DNA2/NAM7 HELICASE FAMILY 1 1340 IPR045055 -
Mtr8g0593 1373 Coils Coil 871 891 - -
Mtr8g0593 1373 MobiDBLite consensus disorder prediction 100 115 - -
Mtr8g0593 1373 MobiDBLite consensus disorder prediction 1284 1373 - -
Mtr8g0593 1373 Pfam AAA domain 1045 1241 IPR041679 -
Mtr8g0593 1373 MobiDBLite consensus disorder prediction 1342 1356 - -
Mtr8g0593 1373 MobiDBLite consensus disorder prediction 78 272 - -
Mtr8g0593 1373 Gene3D - 618 1066 IPR027417 -
Mtr8g0593 1373 CDD DEXXQc_SETX 686 1068 - -
Mtr8g0593 1373 MobiDBLite consensus disorder prediction 1327 1341 - -
Mtr8g0593 1373 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 685 1269 IPR027417 -
Mtr8g0593 1373 MobiDBLite consensus disorder prediction 143 222 - -
Mtr8g0593 1373 MobiDBLite consensus disorder prediction 380 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0593 Mtr-Chr8 7080592 7089249 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0593 - K10706 gmx:100794516 2313.11