Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0581 ATGAGTTTTCTGTTCGGCAGTAGAAAGACTCCCGCAGAGCTTTTGAGGGAAAATAAAAGGATGCTTGATAAGTCTATTAGAGAAATTGAAAGGGAAAGACAAGGATTGCAGTCTCAAGAAAAGAAATTGATTGGAGAGATTAAGAAGAATGCCAAACAAGGACAAATGGGTGCTGTGAGGGTTATGGCCAAGGATCTTATCAGAACTCGCCATCAGATTGAAAAGTTTTACAAGCTTAAATCGCAACTTCAGGGTGTGGCTTTGAGAATTCAGACACTTAAATCTACTCAAGCGATGGGGGACGCTATGAAAGGAGTTACTAAAGCAATGGGTCAAATGAATAGGCAGATGAATCTACCTTCTTTACAGAAGATAATGCAAGAGTTTGAAAGGCAGAATGAGAAGATGGAACTTGTTTCTGAGGTAATGGGAGATGCAATTGATGATGCTTTAGAAGGTGATGAAGAAGAGGAAGAGACAGAAGATCTTGTGAATCAGGTTCTTGATGAGATCGGAATTGATATCAACTCTGAGCTTTTGAATGCACCTGCATCAACCTCAGCCGCTGCACCAGCGGCAAAGAACAGGATTGCTCAGGCCGAACCAACGGGCAATGATGATGGTGGAATAGATGATGATCTACAGGCTAGGTTAGATAACCTAAGGAAAATGTGA 675 0.4148 MSFLFGSRKTPAELLRENKRMLDKSIREIERERQGLQSQEKKLIGEIKKNAKQGQMGAVRVMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGDAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELVSEVMGDAIDDALEGDEEEEETEDLVNQVLDEIGIDINSELLNAPASTSAAAPAAKNRIAQAEPTGNDDGGIDDDLQARLDNLRKM* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0581 224 MobiDBLite consensus disorder prediction 184 213 - -
Mtr8g0581 224 Pfam Snf7 17 184 IPR005024 GO:0007034
Mtr8g0581 224 Gene3D - 6 180 - -
Mtr8g0581 224 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 1 224 IPR005024 GO:0007034
Mtr8g0581 224 Coils Coil 12 46 - -
Mtr8g0581 224 Coils Coil 119 139 - -
Mtr8g0581 224 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 1-LIKE 1 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0581 Mtr-Chr8 6955921 6958662 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0581 K12191 - thj:104815322 356.681