Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0579 ATGGTCCCTGCTTCAAGAACGGAAGGTGCTGGTGGCACTGGAACCCACTTGTTGTCTGCTAAAGTCCGTAAAACTATTCAATCCATTAAGGAAATTGTTGGCAATCATTCTGAGGCTGATATCTATGTTGCTCTCAAGGAAACTAACATGGATCCTAATGAAACTACTCAGAAATTGCTTAACCAAGATCCATTCCATGAAGTGAAGAGAAGGAGAGATCGAAAGAAGGAGAATCAGAATCATGTGAATCAGAATGTAGGGAACAGGGGTTCGAGTGAACCAAGGAGGCATTCTGACAATGGTGGTCAAAGAGCGCAATCCCACAACCCTTCTGAACATAATGCTGGGAACAGGGGTTCGGGTGAACCAAGGAGGCATTCTGAGAATGTTGGTCAAGGACAGCAATCCCAAAAATCTTCTGAACATAATGCTGGGAATAGGGGCTCAGGTGAAGCAAGGAGGCATTCTGACAATGGTGGTCAAAGAGCGCAATCTCACAACCGTTCTGAACATAATGTTGGAAACAGGGATTCGGGTGAACCAAAAAGGCATACTGAGAATGGTGGTCAAGGACCGCAATCCCACAACCCTTCTGAACATAATGTTGAGAACAAGGGTTCAAGTGAACCAAGAAGGCATCCTGAGAAGGGTTCGGGTGAACCGAGAAGGCATCCTGAGAAGGGTTTGGGTGAACCCAGAAGGCATCCTGAAAATGGTGGTCAAGGAATGCATTTACACACCCCTGCTGAACATAGAGTTCGAAGAACAAACTATTCTCGAAATCCACCCAGTTACAGCAGAGAGTTCCGTGTTGTCAGAGACAACAGAGTAAATCATATATATAAAGAAGTGAAACCTCCTTCACAACAGCACTCACCATCTACCAGTGATAAATTACCTGCAAACACTTCTGAAAAGGGCTCGTCAGCAGCTTCGACCAATCAAAGGTCATCTGGGGCTAGAAATCAGCAGACTCTAAATGGTCCTTCTGATTCACATGCTAGACATTCAAAAGATGCTGCCACAAATGCTAGCGACAAAAAAATTACATCTGATGACAAGCAAGGCTTGATTTCGAATGCATCAGCACGGGTGCAACCAATTAAGCCCGACAACATCCATCAAAATTCTTCAACAGTGGCTTCAACCAGTTCTGTCGTTGGGGTGTATTCCTCTTCGACAGATCCAGTTCATGTGCCCTCTCCTGATTCCAGATCATCGGGTGTTGTTGGAGCCATTAGGCGTGAAGTTGGGGTTGTTGGTGTTCGGAGACAGTCTTCTGATCACAAACCGAAACAGTTGTTTCCTCCTAGTAGTTCTAATGCTAATAATTCTATTGTTGGAAAAGATAGTACATCTGCAGATTCATTTCAATCGGTTGACACCGTCCAAACAACTGAACCACTTAGCCAACCAGCTGTCGGCGTTGTTACCGAACCCTCATTCTCTGGCATGTCTGTTAGCAGACCATCCTTGAACAATCAGTATAATAGTAGGGCACATCAACAACTTGTGGGACATCAGAGAGTTTCCCAGCATAATAAGGAGTGGAAACCTAAATCAAGCCAGAAGACAAACAGCAACGGTCCTGGAGTAATTGGAACACCCAAAAAAACTGTTACATCTCCAGCTGAAAATTCTAAAAATTTAGAATCAAAATCAGCACAGCTTCAAGATCAAATTTCACAAATGAGTGTATACGAGAATCAAAATGTGATCATCGCACAACATATTCGTGTTCCAGAAACTGATCGCCGTCGGCTGACCTTTGGTACCATTGGAGTTGCAACAGAGCTTGGTTCTTTGATGCATCAATCTCAGTATCAATTAATAGAAGCTACTGCAAATTTAAATGGGGATTCAGCCACAAGCTTAACAGTACCTGCTTCAGAGTTGTCCACCGACGATGTTTCTGGGAGCAAGCAGGTGGATTTACGTGATGACCACGTTAGAAGTTCCGAGTCCGAATCTCCAGCATCCGGTGCTGCTTCTGAGCAACAGTTGCCTGATAATAAAGAATCCTCAAGCTCTCAGAATCTGGACAATTATGGCAATATCGGATTGGTGCGTGATACAAGTCCATCCTATGCTCCAGCAGCACAACAACAAGATTCTCACAACATGCCCGGCTTCTCTGCTTACGACCCTCCCACTGGTTATGATATTCCTTATTTTAGACCTAATATGGATGAAACTGGACGAGCGCAGGTTCTTTCACCACCTCAGGAGGTTATGAACTCCCACCATGCTGCCAACAATGTTCCCACATCTACAATCTCGATGGTGCAACAACAGCAACAGCAACATCAAGTTGCACAGATGTATCCACAAGTTCATCTTTCACATTATGCTAATCTAATGCCCTATCGTCAGTTTCTGTCCCCAGTTTATGTACCACCCATGGCTGTGCCTGGATATTCAAACAGTGCTCCATATCCTCATCCAACAAACGGCAACAGTTACTTGTTGATGCCTGGAGGTGGTTCCCATCTTAATGCCAACGGCCTTAAATACGGAGTTCAGCAATTCAAGCCGGTCCCTGCTGGTAGTCCTTCTGGGTTTCAAAACTTTGCAAATCCAGGGTATGCCATGTTAGCTCCAGGCGTGGTTGGTGGTGCCTCAGCTTTAGAAGATTCATCTCGAGTCAAGTACAAAGATAATCTTTATGTCCCAAATCCTCAGGCTGAGACATCAGAAATATGGTTACAGAATCCAAGGGATCTTTCCGGAATGCAATCTCCTCAATACTATAACATGCCAGGACAATCGCCGCACGCTGCTCCATTCATGCCTTCACATGCTGGCCATGCTAACTTCAATGCAGCTGCAGCTCAATCTTCTCACATGCAGTTTCCCGGCATGTACCACACTCCTCCACAACAAGCTCCTATGCCTAGTCCTCATCATTTAGGACCAGCAATGGGAAACAATGTCGGAGTGGCTGGAGCTGCTCCTGGAGCACAAGTTGGTGCATATCAGCAACCTCAATTGGGCCACCTCAATTGGACAACAAATTTCTGA 3021 0.4512 MVPASRTEGAGGTGTHLLSAKVRKTIQSIKEIVGNHSEADIYVALKETNMDPNETTQKLLNQDPFHEVKRRRDRKKENQNHVNQNVGNRGSSEPRRHSDNGGQRAQSHNPSEHNAGNRGSGEPRRHSENVGQGQQSQKSSEHNAGNRGSGEARRHSDNGGQRAQSHNRSEHNVGNRDSGEPKRHTENGGQGPQSHNPSEHNVENKGSSEPRRHPEKGSGEPRRHPEKGLGEPRRHPENGGQGMHLHTPAEHRVRRTNYSRNPPSYSREFRVVRDNRVNHIYKEVKPPSQQHSPSTSDKLPANTSEKGSSAASTNQRSSGARNQQTLNGPSDSHARHSKDAATNASDKKITSDDKQGLISNASARVQPIKPDNIHQNSSTVASTSSVVGVYSSSTDPVHVPSPDSRSSGVVGAIRREVGVVGVRRQSSDHKPKQLFPPSSSNANNSIVGKDSTSADSFQSVDTVQTTEPLSQPAVGVVTEPSFSGMSVSRPSLNNQYNSRAHQQLVGHQRVSQHNKEWKPKSSQKTNSNGPGVIGTPKKTVTSPAENSKNLESKSAQLQDQISQMSVYENQNVIIAQHIRVPETDRRRLTFGTIGVATELGSLMHQSQYQLIEATANLNGDSATSLTVPASELSTDDVSGSKQVDLRDDHVRSSESESPASGAASEQQLPDNKESSSSQNLDNYGNIGLVRDTSPSYAPAAQQQDSHNMPGFSAYDPPTGYDIPYFRPNMDETGRAQVLSPPQEVMNSHHAANNVPTSTISMVQQQQQQHQVAQMYPQVHLSHYANLMPYRQFLSPVYVPPMAVPGYSNSAPYPHPTNGNSYLLMPGGGSHLNANGLKYGVQQFKPVPAGSPSGFQNFANPGYAMLAPGVVGGASALEDSSRVKYKDNLYVPNPQAETSEIWLQNPRDLSGMQSPQYYNMPGQSPHAAPFMPSHAGHANFNAAAAQSSHMQFPGMYHTPPQQAPMPSPHHLGPAMGNNVGVAGAAPGAQVGAYQQPQLGHLNWTTNF* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0579 1006 MobiDBLite consensus disorder prediction 640 654 - -
Mtr8g0579 1006 MobiDBLite consensus disorder prediction 390 475 - -
Mtr8g0579 1006 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 225 1006 - -
Mtr8g0579 1006 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 116 - -
Mtr8g0579 1006 MobiDBLite consensus disorder prediction 431 472 - -
Mtr8g0579 1006 MobiDBLite consensus disorder prediction 503 552 - -
Mtr8g0579 1006 MobiDBLite consensus disorder prediction 627 711 - -
Mtr8g0579 1006 MobiDBLite consensus disorder prediction 202 240 - -
Mtr8g0579 1006 MobiDBLite consensus disorder prediction 187 201 - -
Mtr8g0579 1006 MobiDBLite consensus disorder prediction 521 552 - -
Mtr8g0579 1006 MobiDBLite consensus disorder prediction 267 281 - -
Mtr8g0579 1006 MobiDBLite consensus disorder prediction 169 184 - -
Mtr8g0579 1006 MobiDBLite consensus disorder prediction 655 709 - -
Mtr8g0579 1006 MobiDBLite consensus disorder prediction 127 146 - -
Mtr8g0579 1006 MobiDBLite consensus disorder prediction 147 161 - -
Mtr8g0579 1006 Coils Coil 550 570 - -
Mtr8g0579 1006 MobiDBLite consensus disorder prediction 53 357 - -
Mtr8g0579 1006 MobiDBLite consensus disorder prediction 285 331 - -
Mtr8g0579 1006 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 116 - -
Mtr8g0579 1006 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 225 1006 - -
Mtr8g0579 1006 MobiDBLite consensus disorder prediction 332 353 - -
Mtr8g0579 1006 MobiDBLite consensus disorder prediction 63 80 - -
Mtr8g0579 1006 SUPERFAMILY UBA-like 21 80 IPR009060 GO:0005515
Mtr8g0579 1006 Pfam GBF-interacting protein 1 N-terminal 20 77 IPR009719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0579 Mtr-Chr8 6909192 6917244 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0579 - - mtr:MTR_8g019650 1953.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0579 8 6909192 6917244 Mtr8g0579 8 6909192 6917244 ECH