Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0559 ATGAACAATGAAGTGGAAAATCATGGAGGTTCAACAGAAACCGCACTGAATAAGGAATCAAAGAAAGGATGGAGAAAGGTATTAGAGAAGATACGGAGTTGGTTGTCCTACAAAGTCAGGGACAAATGGTTGGAGGATATGAGAGGGAACTTGGGTTTAATAGCGACAGTCATCGCAACAATGACATTTCAAATGATTTTAAATCCACCCGGTGGCGTTATGTCGATTAAAGATGGGGAAAATCCACCCAGTACCGACGCAAGTCCACCCAGTACCAACGCAAATCCACCAGAAGCCGACAATTATGACAAAATTTGTACTTTTGTCTACAAAGAACGTCTATGTCCAGGTGAAGCTGTCTTAGCTGTTAGGGACTCTAGTGGATATCTTCAGTTCCTTATTTCGAACACAATTTGTTTTATTGCATCACTAAGTGTTTGTCTCTTGCTGGTGAGTGGAATTCCTATGCATCACAGGTTTCTTATGTGGCTTTTATCATTAGGGATGTGGGTCACTCTCACAAGCCTTGCTTATTCTTATTTAACAGCTGCGATAATGACCACCCCGGATAGAGTTTATTTTGAAGCTACCGAAGTTGTTAACAAGTTTTTTTTACGTGGATTGGATTGTCGGCGTTTATTGGTTTATGCCATACACTAA 660 0.4076 MNNEVENHGGSTETALNKESKKGWRKVLEKIRSWLSYKVRDKWLEDMRGNLGLIATVIATMTFQMILNPPGGVMSIKDGENPPSTDASPPSTNANPPEADNYDKICTFVYKERLCPGEAVLAVRDSSGYLQFLISNTICFIASLSVCLLLVSGIPMHHRFLMWLLSLGMWVTLTSLAYSYLTAAIMTTPDRVYFEATEVVNKFFLRGLDCRRLLVYAIH* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0559 219 PANTHER CASKIN 14 194 - -
Mtr8g0559 219 MobiDBLite consensus disorder prediction 81 98 - -
Mtr8g0559 219 MobiDBLite consensus disorder prediction 74 99 - -
Mtr8g0559 219 Pfam Domain of unknown function 42 78 IPR026961 -
Mtr8g0559 219 Pfam Domain of unknown function 116 186 IPR026961 -
Mtr8g0559 219 PANTHER - 14 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0559 Mtr-Chr8 6662520 6663179 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0559 3 189 Miscellaneous Gene Families AT1G10340 25.123 5.56e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0559 - - mtr:MTR_8g018980 386.341