Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0551 ATGGAACAAGAAGAAGACATATCACCATTTTGGCTCCCAAAAACCACCACAAACCACCACCGTCTCCGCCGCACATACTCACTCCTCCTCACAACAACCACCACCCTCTTCCTCATCCTCATAACAATCCTAATCTTCATACTCATTGTGGTCCCCACTATATACTCTTTCATTTCAAACATCTTCAAATTCAAACCACAAGATGTTAAACACTCTTGGGATTACTTAAACCTTATACTAGTTCTCTTCGCTGTCGTTTGCGGTTTTCTTACTAAAAACGACACCAATGAAACGCAAACGACACCGCGTCGTTTTGATAGTTATAATACTCATCGTAGAAGCTTTTCGAATCCTGACACTGAAACGCCGCCGTTTTGGTATGGTAATGAAAATCCATCGGTGTTTAATCGGTTGAGAAGCGGTGGATCGTATCCGGATCTCCGTCGACCGGAGGTGGTGGTTGCTGACGGCGGCGATGATCGGTACCGGTTTTATGATGATACTCGTGTAAATTTTCGTTATCGGTATCCGAGATTTCAAGATGAAGATGAATTTCACCGGGAGACGGTTACTTCCGGTGAAACTTTCCGGCAACCGGAGGTGAAACCAGTAACCGAAAGTGAAACACCGCCGTTTTGGTATGAGAATTCTAGTCTGTCTTCGTTTAACCGGTTGAGAAGCAGAGGATCGTATTCGGATCTCCGGCGATCGGAGGCGGTAGTTGTTGACGATGAACGGTACCGGTTTTATGATGATACTCATATTCACTTCCCTTATCGGAACTCTAGATTGGAAAGTGAAGATGAATTTCACCGGGAAAAGGTTACTTCCGGTGAAGTTTCCCGGCGACCGGAGGTGAAACCAGTGCCAGATTCTCAAACTGAAGATGTTGGAAGAAATGTTGATCCGATGTATGAAGTGGAAACGGTTGAGAAATCGGTAATCAATGATTCTGTTGTGGAGAATTCACAACCGCCGCCTCTGCAACCGATACCTGCGTTGAGGAAGAAGAAAACCAGGAGTGCATCTATGGAAAACGTGGCAGTAGTGACTTCTGCGGAATTTTCCTCTCTGGTGCCGGAACCGGAGCTTAATCCGCATCGGCAACCGGCTGCGAGGAAGAAGAAAATTAGGAGTGAATCTGAAGTAAACACGGCAGCAGTTACTTCTGCAGAATTTTCTTCGCCAGTGCCGGAACAGGAGCTAAATCCACAACTGCCGGTGATGAGGACTAAAGGTGTTCGAGGAAATTTCAAGCGAACAAATCAACCGAAAGCGATCGAGAAATTGGAAGATAATGATTTTTTCGTTGAGAATTATCTACCACAGACGGTGCCACAGCGGTCAATGGCGGAGAGAAAGACAGGCATTCCTCTTAAGAAGAAAAGAGGGAATGCTACTAAAGAGTTTTTAGCTTCATTAAGAGGAAAGAAGAAGAAACAAAGATCAAAAAGTGTTGAAAATTTTGAAACCATTCAAAATTCTCAACCTTCGCCACTTGTTTCACAACCCCCTCCGCCGCCACCCCCGCCTCCCCCAGCGTCGGTTTTTCACAACCTGTTCACTTCGAACAAAAGCAAACACAAAAAAACCTACCTTGTTCCTATGGCAAGAGAGAATTCTAATTATAGATTGGAAAAGAATGTGGTGATGACTGGTAATGAGTCACCCTTGATTCCTATCCCTCCTCCGCCACCGCCTCCACCGTTTAAGTTACCGGCGTGGAAGTTTAGAGTTCAGGGTGATTATGTTAGGGTTGATAGCATTGGTAGTTCGAGGAGTGGTTCACCAGATTCAGATGAAGTTGTTGAGTCACCAGTTAGCCAATGTAGTAATAGTCCCTATGCTGAAGATGGTGAAGAGAAGAATGCCACTGAAATTGGAAATGCAAGTGCAAATCCGTTGTTTTGTCCTAGTCCAGATGTTGATACCAAAGCTCAGAACTTTATACAGAATTTTAGAGCTGGGTTGAGGATGGCTAAGATGAATTCCTTGAGGGAGAAGCAAGGAATTGGGAGGTCCAATCTTGGTCCTTTACAAAACCCTTATATTTAA 2055 0.4462 MEQEEDISPFWLPKTTTNHHRLRRTYSLLLTTTTTLFLILITILIFILIVVPTIYSFISNIFKFKPQDVKHSWDYLNLILVLFAVVCGFLTKNDTNETQTTPRRFDSYNTHRRSFSNPDTETPPFWYGNENPSVFNRLRSGGSYPDLRRPEVVVADGGDDRYRFYDDTRVNFRYRYPRFQDEDEFHRETVTSGETFRQPEVKPVTESETPPFWYENSSLSSFNRLRSRGSYSDLRRSEAVVVDDERYRFYDDTHIHFPYRNSRLESEDEFHREKVTSGEVSRRPEVKPVPDSQTEDVGRNVDPMYEVETVEKSVINDSVVENSQPPPLQPIPALRKKKTRSASMENVAVVTSAEFSSLVPEPELNPHRQPAARKKKIRSESEVNTAAVTSAEFSSPVPEQELNPQLPVMRTKGVRGNFKRTNQPKAIEKLEDNDFFVENYLPQTVPQRSMAERKTGIPLKKKRGNATKEFLASLRGKKKKQRSKSVENFETIQNSQPSPLVSQPPPPPPPPPPASVFHNLFTSNKSKHKKTYLVPMARENSNYRLEKNVVMTGNESPLIPIPPPPPPPPFKLPAWKFRVQGDYVRVDSIGSSRSGSPDSDEVVESPVSQCSNSPYAEDGEEKNATEIGNASANPLFCPSPDVDTKAQNFIQNFRAGLRMAKMNSLREKQGIGRSNLGPLQNPYI* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0551 684 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 213 680 - -
Mtr8g0551 684 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 133 209 - -
Mtr8g0551 684 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 128 - -
Mtr8g0551 684 MobiDBLite consensus disorder prediction 367 381 - -
Mtr8g0551 684 MobiDBLite consensus disorder prediction 360 382 - -
Mtr8g0551 684 MobiDBLite consensus disorder prediction 266 292 - -
Mtr8g0551 684 MobiDBLite consensus disorder prediction 499 516 - -
Mtr8g0551 684 MobiDBLite consensus disorder prediction 189 209 - -
Mtr8g0551 684 MobiDBLite consensus disorder prediction 447 519 - -
Mtr8g0551 684 MobiDBLite consensus disorder prediction 320 339 - -
Mtr8g0551 684 MobiDBLite consensus disorder prediction 588 628 - -
Mtr8g0551 684 MobiDBLite consensus disorder prediction 588 618 - -
Mtr8g0551 684 MobiDBLite consensus disorder prediction 454 476 - -
Mtr8g0551 684 MobiDBLite consensus disorder prediction 266 298 - -
Mtr8g0551 684 PANTHER COTTON FIBER (DUF761) 133 209 - -
Mtr8g0551 684 PANTHER COTTON FIBER (DUF761) 213 680 - -
Mtr8g0551 684 PANTHER COTTON FIBER (DUF761) 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0551 Mtr-Chr8 6539229 6541971 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0551 - - mtr:MTR_8g018800 1246.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0551 8 6539229 6541971 Mtr8g0551 8 6539229 6541971 ECH
Mtr2g3465 2 48781856 48783765 Mtr8g0551 8 6539229 6541971 PCT