Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0537 ATGTATTCAGGGTTCAAAAGTATGCTTAAGAGAGGCCAAAAGGTGAAGGGCACAGTTGTGTTGATGCAAACAAATGTTTTCGACATCAATGCCATCAATGGTGCAACTAAAAACACCACTAATTTGGTCAAAACTGGAATCAAGGCTGTTGGTGGTGTCGCCGGCACTCTAATTGACACCGCCGGGGCCTTTGTCGGCCGTTCTGTGGCTCTCAGGTTGATCAGTGCTACCACTGCCGATGGAAGCGGAAAAGGGAAAGTCGGAGAGAAAACATTTATTGAAGGTTTTGTTACTTCCATGCCAATTTTGGGAGCAGGACAGTCTGCATATGATATTCATTTTGAATGGAATAGTGACATGGGAGTTCCAGGAGCATTTTATATTGAGAGTAACATGACACGAGAATTCTTCCTTGTAAGTTTGACACTTGAAGATATTCCAAACCATGGAACCATCAACTTTGTATGCAACTCATGGATTTACAGTGCTGACAAGTATAAAACGAAACGCATCTTCTTCGCCAACAAGACATACCTTCCAAGTGAAACACCAGCTCCATTAGTCTACTATAGAGAAGAAGAATTGAAGACTTTAAGAGGAGATGGAACGGGTCAGCGCAAGGAACACGATAGAATCTATGACTACGATGTTTACAATGACTTGGGTGATCCTGACAAGTACGCACACTTGGCTCGTCCCGTTATTGGAGGATCCGACACCTTGCCTTACCCTCGAAGGGGCAGAACCGGCAGGAAACCAGCTAAAAAAGATCCTAAAAGTGAGAGACGGGACGACTTTGTTTACGTTCCAAGAGATGAAGCATTTGGTCACTTGAAGTCTTCAGATTTTCTTGTTTACATACTCAAATCAGCTTCTCAAAGTTTCATACCTCAATTACAATCTGCAATTACATTACAACTCAATAAGCCAGAATTTAATAGCTTTGATGATGTGCGATCATTTTATGATGGTGGGATTAAATTACCTACTAGTATACTTAGCAAACTTAGCCCCATACCATTTTTCAAGGAACTCTTCCGAACTGATGGTGAATCGGCCCTAAAGTTTCCACCGCCTAAAGTGATTCAAGTTAATCAGTCTGCGTGGATGACTGATGAAGAATTTGCAAGGGAGATGATTGCTGGTGTGAATCCACACATTATAAAAAGAATTCAGGAGTTCCCACCAAAGAGCAAGCTAAATACCGATTATGGTGATAATACGAGCACAATAACCGAAGAACAGTTAGAGCTAAACATGGATGGGGTCACTGTAGAAGAAGCTATCCAAAACAACAGGCTTTACATACTTGATCACCATGACTCAATATATCCATATCTGAGGAAAATAAATGCAGCTGATACAACAAAGGCATATGCTACTAGAACTATCATTTTCTTACAAAATGATGGAACTTTGAAGCCATTAGCCATTGAGCTAAGTAGCCCACATCCTCAGGCTGATAGCTTTGGTCCTGTTAGTGATGTTTACTTGCCTGCAAAGGAAGGTGTTGAATCTTCTATTTGGCTCCTTGCCAAGGCTTATGTTATTGTAAATGACTCTTCTGTTCACCAACTTGTCAGCCACTGGTTGAACACGCACGCTGTTGTTGAGCCATTCATCATAGCAACTAATAGGCATCTTAGTGTGGTTCACCCTATTCACAAACTTCTGCTTCCACATTATCGTGACACAATGAACATTAATGCACTTGCAAGGAGTGTCTTGGTAAATGCAGAGGGTATTATAGAATCAACATTCTTATTGGGAAGTCATTCTATAGAACTGTCTTCTGTATTATATAAGGATTGGGTTTTCCCAGATCAAGGACTACCTAATGATCTACTTAAAAGAGGAGTGGCTGTTGAGGATCCAACTTCCCCACATGGAATTCGCCTTCTGATAGAGGACTACCCTTATGCTGCTGATGGACTAGAGATATGGGATGCTATCAAGTCATGGGTTGAAGAATATGTGAATTTCTACTACAAGTCAGATGTTGCTGTTGCGCAAGATTCTGAACTGCAAGCATTTTGGAGAGAAGTTGTAGAGGTGGGTCATGGTGATTTGAAGAATGCTACATGGTGGTTTAAGATGCAAACTTGTACAGAGTTGATTGAAGCTTGCACTATCCTCATATGGATTGCTTCAGCACATCATGCAGCTGTTAATTTTGGTCAATACCCATATGGAGGATATATACTTAACCGACCAACTAAGAGCCGGAGACACATGCCTAAGAAAGGGTCTGCTGAGTATGACGAGCTTTCTAAGAACTTTCAGAAGGCGTATCTGAGGACAATCACACCAAAAAATGATACCCTAACTGACCTTACAATCATAGAGGTCTTGTCAAGGCATGCTTCTGATGAGCAATACCTTGGACAGAGAAATGAAGGTGAGGCTTGGACTTTTGATTCACAGCCATTAGAAGCTTTCAAGAGGTTTGGAAGGAAGTTGGCTGAAATTGAGGCAAAGCTCATCAAAAGGAACAATGATGAGTCATTGAGAAACCGATACGGGCCTGTGAAGATGCCATACACTCTGCTTTATCCTTCTAGTGAGGAAGGATTGACTGGCAGAGGCATTCCTAATAGTATCTCCATTTAA 2610 0.4149 MYSGFKSMLKRGQKVKGTVVLMQTNVFDINAINGATKNTTNLVKTGIKAVGGVAGTLIDTAGAFVGRSVALRLISATTADGSGKGKVGEKTFIEGFVTSMPILGAGQSAYDIHFEWNSDMGVPGAFYIESNMTREFFLVSLTLEDIPNHGTINFVCNSWIYSADKYKTKRIFFANKTYLPSETPAPLVYYREEELKTLRGDGTGQRKEHDRIYDYDVYNDLGDPDKYAHLARPVIGGSDTLPYPRRGRTGRKPAKKDPKSERRDDFVYVPRDEAFGHLKSSDFLVYILKSASQSFIPQLQSAITLQLNKPEFNSFDDVRSFYDGGIKLPTSILSKLSPIPFFKELFRTDGESALKFPPPKVIQVNQSAWMTDEEFAREMIAGVNPHIIKRIQEFPPKSKLNTDYGDNTSTITEEQLELNMDGVTVEEAIQNNRLYILDHHDSIYPYLRKINAADTTKAYATRTIIFLQNDGTLKPLAIELSSPHPQADSFGPVSDVYLPAKEGVESSIWLLAKAYVIVNDSSVHQLVSHWLNTHAVVEPFIIATNRHLSVVHPIHKLLLPHYRDTMNINALARSVLVNAEGIIESTFLLGSHSIELSSVLYKDWVFPDQGLPNDLLKRGVAVEDPTSPHGIRLLIEDYPYAADGLEIWDAIKSWVEEYVNFYYKSDVAVAQDSELQAFWREVVEVGHGDLKNATWWFKMQTCTELIEACTILIWIASAHHAAVNFGQYPYGGYILNRPTKSRRHMPKKGSAEYDELSKNFQKAYLRTITPKNDTLTDLTIIEVLSRHASDEQYLGQRNEGEAWTFDSQPLEAFKRFGRKLAEIEAKLIKRNNDESLRNRYGPVKMPYTLLYPSSEEGLTGRGIPNSISI* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0537 869 ProSiteProfiles PLAT domain profile. 43 174 IPR001024 GO:0005515
Mtr8g0537 869 Gene3D - 179 278 - -
Mtr8g0537 869 SUPERFAMILY Lipoxigenase 179 869 IPR036226 -
Mtr8g0537 869 Gene3D - 279 367 IPR027433 -
Mtr8g0537 869 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 177 869 IPR013819 GO:0016702|GO:0046872
Mtr8g0537 869 PRINTS Lipoxygenase signature 506 523 IPR013819 GO:0016702|GO:0046872
Mtr8g0537 869 PRINTS Lipoxygenase signature 524 541 IPR013819 GO:0016702|GO:0046872
Mtr8g0537 869 PRINTS Lipoxygenase signature 544 564 IPR013819 GO:0016702|GO:0046872
Mtr8g0537 869 PRINTS Plant lipoxygenase signature 144 162 IPR001246 GO:0016491
Mtr8g0537 869 PRINTS Plant lipoxygenase signature 170 191 IPR001246 GO:0016491
Mtr8g0537 869 PRINTS Plant lipoxygenase signature 209 225 IPR001246 GO:0016491
Mtr8g0537 869 PRINTS Plant lipoxygenase signature 242 261 IPR001246 GO:0016491
Mtr8g0537 869 PRINTS Plant lipoxygenase signature 309 330 IPR001246 GO:0016491
Mtr8g0537 869 PRINTS Plant lipoxygenase signature 354 370 IPR001246 GO:0016491
Mtr8g0537 869 PRINTS Plant lipoxygenase signature 393 412 IPR001246 GO:0016491
Mtr8g0537 869 PRINTS Plant lipoxygenase signature 459 483 IPR001246 GO:0016491
Mtr8g0537 869 PRINTS Plant lipoxygenase signature 781 795 IPR001246 GO:0016491
Mtr8g0537 869 SMART LH2_4 13 175 IPR001024 GO:0005515
Mtr8g0537 869 Pfam Lipoxygenase 187 852 IPR013819 GO:0016702|GO:0046872
Mtr8g0537 869 PANTHER LINOLEATE 9S-LIPOXYGENASE-4 7 869 - -
Mtr8g0537 869 CDD PLAT_LH2 14 175 IPR042057 -
Mtr8g0537 869 Pfam PLAT/LH2 domain 79 173 IPR001024 GO:0005515
Mtr8g0537 869 Gene3D - 502 868 - -
Mtr8g0537 869 ProSitePatterns Lipoxygenases iron-binding region signature 2. 551 561 IPR020834 GO:0016702|GO:0046872
Mtr8g0537 869 Gene3D - 368 501 - -
Mtr8g0537 869 MobiDBLite consensus disorder prediction 238 263 - -
Mtr8g0537 869 ProSitePatterns Lipoxygenases iron-binding region signature 1. 524 538 IPR020833 GO:0016702|GO:0046872
Mtr8g0537 869 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 13 178 IPR036392 GO:0005515
Mtr8g0537 869 Gene3D PLAT/LH2 domain 5 178 - -
Mtr8g0537 869 PANTHER LIPOXYGENASE 7 869 IPR000907 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0537 Mtr-Chr8 6356548 6361498 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0537 1 869 Acyl Lipid Metabolism Gene Families AT1G55020 54.106 0.0 974
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0537 K15718 - gmx:100816880 1398.65