Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0511 ATGGCATCCAACGGCTTGTGTCCTTCAATAAAAAACATTCTTCTTTTAGACTCTGAAGGGAAGCGTGTGGCAGTCAAGTATTACTCAGATGACTGGCCGACAAACAGTTCAAAGTTAGCTTTTGAGAAGTTTGTGTTCACTAAGACTGTTAAGACAAATGCGCGGACAGAAGCTGAGATAACACTGCTTGAGAACAATATCGTTGTTTACAAATTTGTGCAAGACTTGCATTTCTTTGTCACTGGTGGTGATGATGAAAATGAGCTCATTTTGTCATCTGTTCTTCAAGGTTTCTTTGATGCAGTCACCCTTTTGCTGAGGAGCAATGTTGACAAAAGTGAGGCACTTGAGAACTTGGATCTCATTCTTTTATGCCTTGATGAGATTGTTGATGGAGGGATTATACTCGAAACAAATGGACCTCTTATCGCCGAAAAAGTTACCTCCCACAACATGGATGCTGATGCTCCCTTATCAGAGCAGACACTAACTCAGGCATGGGCTACAGCCAGAGACACTTTCACAAGAACTCTTTTAACATGA 543 0.4144 MASNGLCPSIKNILLLDSEGKRVAVKYYSDDWPTNSSKLAFEKFVFTKTVKTNARTEAEITLLENNIVVYKFVQDLHFFVTGGDDENELILSSVLQGFFDAVTLLLRSNVDKSEALENLDLILLCLDEIVDGGIILETNGPLIAEKVTSHNMDADAPLSEQTLTQAWATARDTFTRTLLT* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0511 180 Gene3D - 2 150 - -
Mtr8g0511 180 SUPERFAMILY SNARE-like 10 150 IPR011012 -
Mtr8g0511 180 PANTHER ZETA-COAT PROTEIN 5 180 IPR039652 GO:0006890|GO:0030126
Mtr8g0511 180 CDD Zeta-COP 11 146 - -
Mtr8g0511 180 Pfam Clathrin adaptor complex small chain 10 151 IPR022775 -
Mtr8g0511 180 PANTHER CLATHRIN ADAPTOR COMPLEX SMALL CHAIN 5 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0511 Mtr-Chr8 6054706 6058100 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0511 K20472 - gmx:100775726 318.546