Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0501 ATGACTATACTCTCTACTATGTGGCTAATGCCTCTCTTTACTTTCATTTATGTCAATGGTATTCTTCCTATTGAAGCTACTCACCATGTTTATAGAAACCTTCAGAGTTTATCTTCTGATGATTCCTTCAAACAACCTTACAGAACTGCTTATCATTTCCAACCTCCAAAGAATTGGATAAATGATCCTAATGGACCATTGAGTTACAAAGGACTTTATCATCTATTCTACCAATACAATCCTAAAGGTGCAGTTTGGGGAAATATTGTATGGGCACATTCTGTTTCAACTGATCTTGTTAACTGGACCCCACTAGATCCAGCCATCTTTCCATCTCAACCGTCCGATATAAATGGTTGTTGGTCAGGATCAGCCACAATACTTCATGGTAACAAACCAGCTATTTTATACACTGGAATTGACCCAATGAATCACCAAGTTCAAAATATAGCATACCCTAAAAATTTATCCGACCCTTTTCTAAGGGAATGGATTAAGTCACCAAAAAATCCATTAATGGAACCAACTAGTGAAAATAAAATTAATGCAAGTTCATTTAGAGATCCAACTAGTGGTTGGTTAGGAAAAGATGGAAATTGGAGGATAATTATTGGTAGCAAAAGAAACACTAGGGGAATTGCAATTTTGTATAAGAGTAAAGATTTTATTAATTGGATTAAATCAAAACACCCTTTGCATTCAGCTAAAGGCACTGGAATGTGGGAGTGTCCTGATTTTTTTCCTGTTTTGAAAATTGGTAGATTTGGTGTTGACACGTCATTAAATAGTGACGATGTTAGGCATGTATTGAAGGTTAGTTTGGATGATAAAAAACATGATTATTATCTCATTGGGACTTATAATGATGAAAAGGACAAATTTGTCCCTGATAAAGGGTTTGAGGAGGAAAATATTGAACAAATTTTGAGATATGATTATGGAAAATATTATGCATCAAAAACTTTCTTTGATGATGGGAAGAATAGAAGGATTTTGCTTGGATGGGTCAATGAGTCTTCAAGTGTTGCTGATGATATCAAGAAAGGATGGTCTGGAATCCATACAATTCCAAGGACTATTTGGTTACACAAGTCAGGAAAACAGTTGATACAGTGGCCAGTTGTGGAAGTTGAGAAGTTAAGGGTAAATCCTGTCAAATGGCCCACTAAAATACTCAAAGGAGGTGAACTATTTCCAATTAATGGTGTCACAGCAGCACAAGCTGATGTTGAAATTTCATTTGAAGTGAATAATATTAGAGAGGCTGAAGTTTTGGACAAATGGACAGACCCTCAAATTCTGTGTAGTCAAAAGGGCACATCAGTGAAAAGTGGATTGGGACCTTTTGGCCTGCTAGTTTTTGCTTCAAAGGGGTTGCAAGAGTTCACATCAGTGTTCTTTAGAATATTCATTTACCAACAAAAAAATTTGGTGCTCTTTTGTAGTGACCAAAGCAGGTCTTCTTTGAATAAAGATAATGATATGACCACTTATGGGACTTTTATAGACGTGGATATTCTTCATGAGAAGCTGTCATTGAGAAGTTTGATTGATCACTCTGTGGTAGAGAGTTTTGGAGGAGAAGGGAAGGCATGCATCACATCAAGAGTTTATCCTACATTGGCCATCAATGATAAAGCACTAATTTATGCTTTCAATAATGGAACTACTAATGTGAAGATCACAAGATTGAGTGCTTGGAGCATGAAGAAAGCACAATTAAATGGAAACTTATAA 1737 0.3598 MTILSTMWLMPLFTFIYVNGILPIEATHHVYRNLQSLSSDDSFKQPYRTAYHFQPPKNWINDPNGPLSYKGLYHLFYQYNPKGAVWGNIVWAHSVSTDLVNWTPLDPAIFPSQPSDINGCWSGSATILHGNKPAILYTGIDPMNHQVQNIAYPKNLSDPFLREWIKSPKNPLMEPTSENKINASSFRDPTSGWLGKDGNWRIIIGSKRNTRGIAILYKSKDFINWIKSKHPLHSAKGTGMWECPDFFPVLKIGRFGVDTSLNSDDVRHVLKVSLDDKKHDYYLIGTYNDEKDKFVPDKGFEEENIEQILRYDYGKYYASKTFFDDGKNRRILLGWVNESSSVADDIKKGWSGIHTIPRTIWLHKSGKQLIQWPVVEVEKLRVNPVKWPTKILKGGELFPINGVTAAQADVEISFEVNNIREAEVLDKWTDPQILCSQKGTSVKSGLGPFGLLVFASKGLQEFTSVFFRIFIYQQKNLVLFCSDQSRSSLNKDNDMTTYGTFIDVDILHEKLSLRSLIDHSVVESFGGEGKACITSRVYPTLAINDKALIYAFNNGTTNVKITRLSAWSMKKAQLNGNL* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0501 578 ProSitePatterns Glycosyl hydrolases family 32 active site. 52 65 IPR018053 GO:0004553|GO:0005975
Mtr8g0501 578 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 4 575 - -
Mtr8g0501 578 SUPERFAMILY Concanavalin A-like lectins/glucanases 373 571 IPR013320 -
Mtr8g0501 578 Gene3D Glycosyl hydrolase domain; family 43 56 383 IPR023296 -
Mtr8g0501 578 CDD GH32_Fruct1-like 58 362 - -
Mtr8g0501 578 SUPERFAMILY Arabinanase/levansucrase/invertase 43 374 IPR023296 -
Mtr8g0501 578 PANTHER CELL-WALL INVERTASE 4 575 - -
Mtr8g0501 578 Pfam Glycosyl hydrolases family 32 N-terminal domain 52 373 IPR013148 -
Mtr8g0501 578 Pfam Glycosyl hydrolases family 32 C terminal 376 568 IPR013189 -
Mtr8g0501 578 SMART glyco_32 52 529 IPR001362 GO:0004553|GO:0005975
Mtr8g0501 578 Gene3D - 384 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0501 Mtr-Chr8 5921444 5925937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0501 69 575 Glycoside Hydrolase AT3G13790 66.214 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0501 K01193 - gmx:100776791 967.222