Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0498 ATGCCGAAGACTAGTTTTCAGGAATCTGGTTCTGTTATGAAGAGGTCTAAAAAGACAACTTTGATTTCTCAACATGTGTATAATTGTGTTGCGACAGGACACCAGGACAGGCTAGGTGACATGCCAGATTGCCTTATTCATCATATTTTGTCTTTTATGGAGACAAGAGATGCAATTCGAACTTGTGTTCTATCGAAAAGGTGGAGGTATATTTGGAAATCAATTCCCTGTCTGTACTTCAACAGTAAATCATTCACTCGGTTGGTTGATTTCAAGAAGTTTGTGTTGTGGGTTCTATCTCATCGCGATAATTCTCATGTCAAAGTTCTTATTTACTATCGCTTTGGGGTAGATTATGCGACGGATCAGTATCTTTTGAATAAGGTTATTGAATATGCTGCATTACATGGTGTCGAAGAAATCAGAATTAATCTCCGGGCCAAAACCTCTGGCTGTCCACCAATTGAAATTCCATTGCCTCTTTTTACTTGCCAATCCTTGAAAAGGCTCGAGTTAAAAGATTGCCATCCTACAAATGTTTCTTCTCCTTTTGGTTGCAAATCATTGGACATTTTACACCTCGAGCATTTTTCAATGTTTCCTACTGCGGCCGACTTTTCAAATCCATTTGCAAGTTTATCCGAACTTTTTGGTTTTACAACATTGACAGCTTTGCACCTAAATAGCTTTGCCTTATGTTATACGGGAATGGAGTGTCTGGATCCGTTTGCTAATTGTGTCAATTTGAAGATTTTGCAATTAAGCGAAATGTCCTTTAAGTCAGATTTGAGTCCTAAGGATTTTGTCATATCTGCTCCCCAACTCAGTAACTTGAGTCTAATTTGCAACCGCTTTAGATGTAAGATCGCAGTTACTTCACCACAGCTTCTCAATTTCAGTTACTTGTATTCCACACCTTGTGCCTTCTTTGAGTTTAGTCTTCCTTCTTTGGATGGATTGATCATTGATGTTCATGAATTACACGAACCTTTGGAAAAATCTCATCGAAATAAAAGAGAGGAGACTTTACATGGTTTGATCAATATGTTACGGGGACATCATAAGGCTGAAGCTGTTAAACTATCCTTCTGTACAGTTGCGGTTACTTGTGGGGCTGCAGCCTTAGAAAAGCCAGAATGTTTGTCTTATAGTAAATGGAAGTCATTGAACTTTGGAGTGGGATCAACATATAAAATCTTTATCAGCAAACTTGACCATATAACTGCCTACTTCCGCAATTGTTCTCAGCATGTAGACTTTGAGATTGTGAATATTTAA 1278 0.3818 MPKTSFQESGSVMKRSKKTTLISQHVYNCVATGHQDRLGDMPDCLIHHILSFMETRDAIRTCVLSKRWRYIWKSIPCLYFNSKSFTRLVDFKKFVLWVLSHRDNSHVKVLIYYRFGVDYATDQYLLNKVIEYAALHGVEEIRINLRAKTSGCPPIEIPLPLFTCQSLKRLELKDCHPTNVSSPFGCKSLDILHLEHFSMFPTAADFSNPFASLSELFGFTTLTALHLNSFALCYTGMECLDPFANCVNLKILQLSEMSFKSDLSPKDFVISAPQLSNLSLICNRFRCKIAVTSPQLLNFSYLYSTPCAFFEFSLPSLDGLIIDVHELHEPLEKSHRNKREETLHGLINMLRGHHKAEAVKLSFCTVAVTCGAAALEKPECLSYSKWKSLNFGVGSTYKIFISKLDHITAYFRNCSQHVDFEIVNI* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0498 425 PANTHER F-BOX PROTEIN-LIKE 22 425 - -
Mtr8g0498 425 SUPERFAMILY F-box domain 34 87 IPR036047 GO:0005515
Mtr8g0498 425 PANTHER CYCLIN-LIKE F-BOX 22 425 - -
Mtr8g0498 425 Gene3D - 22 78 - -
Mtr8g0498 425 ProSiteProfiles F-box domain profile. 35 88 IPR001810 GO:0005515
Mtr8g0498 425 SMART fbox_2 41 82 IPR001810 GO:0005515
Mtr8g0498 425 Pfam F-box domain 40 76 IPR001810 GO:0005515
Mtr8g0498 425 SUPERFAMILY RNI-like 150 300 - -
Mtr8g0498 425 Gene3D Ribonuclease Inhibitor 133 309 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0498 Mtr-Chr8 5772973 5777680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0498 36 199 EF-hand Containing Proteins AT5G41840 28.108 8.01e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0498 - - vun:114167379 697.967