Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0474 ATGGCTTCAGTTGGTACAGTCAAATTCTTGTTATGCTTAATTCTATGGCTATGGAACTGCAACTTTCTACCTCATTGTCAAGGTAAACAAGAGTACCCTTTTATTAAAAAAGCAAGTACATTTTCATCACCATCAATTTCAACTACATCAATAAACAAGGCTTATGATTACATAATAGTGGGAGGTGGAACTGCAGGGTGTCCTTTAGCTGCAACATTATCTCAAAACTTTAGTGTATTAGTACTTGAAAGAGGTGGTGTTCCTTTCACTAATCCAAATGTAACATTTCTTGAGAACTTCCATATTACCTTGGCAGACCTTTCACCAACTTCAGCTTCTCAATATTTTGTTTCAACTGATGGAGTTTTCAATGCAAGGGGAAGAGTTTTAGGTGGTGGTAGCTCTATCAATGCTGGTTTCTATACTAGAGCTAGCTCAAGGTTTATAAACAAGGCAGGGTGGGATGTGAAGCTAGTAAATGAGTCATACCCTTGGGTTGAGAAGCAAATTGTTCATCGTCCAAAGTTTTCACCATTTCAAAGAGCAGTTAGGGACAGCCTTATAGACAATGGAGTCTCTCCTTTTAATGGTTTCACCTATGATCATATATATGGAACAAAAGTCGGCGGAACCATTTTCGACAGATTTGGTCGCCGACACACAGCTGCCGAACTTCTTGCTTCTGGAAACCCTGACAAACTTACTGTTTTGGTTCATGCTACTGTCCAAAAGATTGTTTTTGATACAACAGGTAAGAGACCAAAAGCAATAGGGGTTATTTTCAATGATGAAAATGGGAAACAACATGAGGCAAGGTTGGGAAATGATATGCAAAGTGAAGTGATATTGTCTAGTGGGGCAATTGGGTCTCCTCAAATGCTATTGCTAAGTGGAATTGGTCCTAAAGATGAACTTCAGAACTTGAACATCTCAGTGGTCCTTAACAATCCTTTTGTTGGGAAGGGAATGATAGATAATCCTATGAACACAGTTTTTGTTCCTTCTAATAGGCCAGTTCATCAGTCACTCATACAAACTGTAGGTATCACCAAGAAAGGTATATATATTGAGGCTAGTAGTGGATTTAGTCAGTCCAACAGCAGCATTCACTGCCATCATGGTATCATGTCACCTGAGATCGGACAACTTCACACAATTCCTCCCAAGCAAAGATCAATAGAAGCTATTGAAGCTTACAAGAAGAATAAGCGAGACATACCTGTTGAAGCATTCAAGGGAGGCTTTGTCTTGTCCAAAGTTGGCAGTGCTTGGTCAGTAGGTGAGCTCAAGTTGGTCAACACCAATGTGAATGAAAATCCTGCTGTTACCTTCAACTACTTCAGTCATCCATACGATTTAAAGCGCTGCGTCGAAGGGATCAGCATGGCCATTAAAGTAGTCCAGTCAGAACACTTCACAAACTACACATTATGTAAAAGAGAAACCGCAGAGAGACTTCTTAACCTTAGTGTGAAGACTACTGTCAACTTCATACCAAAACATGCCAATGACACATCTTCCCTAGAGCAGTTCTGCAAAGACACTGTCATCACAATTTGGCATTACCATGGTGGATGTCATGTGGGAAAGGTAGTTAGCCCTGATTATAAGGTTCTTGACGTTGACAGACTCCGAGTCGTCGATGGTTCAACGTTTACTGAATCACCAGGAACAAATCCTCAAGCCACTGTGATGATGATGGGAAGGTACATGGGAGTGAAGATTTTGAGAGGTAGGTTGGGAAGATTGGCTGGTATATAA 1761 0.4055 MASVGTVKFLLCLILWLWNCNFLPHCQGKQEYPFIKKASTFSSPSISTTSINKAYDYIIVGGGTAGCPLAATLSQNFSVLVLERGGVPFTNPNVTFLENFHITLADLSPTSASQYFVSTDGVFNARGRVLGGGSSINAGFYTRASSRFINKAGWDVKLVNESYPWVEKQIVHRPKFSPFQRAVRDSLIDNGVSPFNGFTYDHIYGTKVGGTIFDRFGRRHTAAELLASGNPDKLTVLVHATVQKIVFDTTGKRPKAIGVIFNDENGKQHEARLGNDMQSEVILSSGAIGSPQMLLLSGIGPKDELQNLNISVVLNNPFVGKGMIDNPMNTVFVPSNRPVHQSLIQTVGITKKGIYIEASSGFSQSNSSIHCHHGIMSPEIGQLHTIPPKQRSIEAIEAYKKNKRDIPVEAFKGGFVLSKVGSAWSVGELKLVNTNVNENPAVTFNYFSHPYDLKRCVEGISMAIKVVQSEHFTNYTLCKRETAERLLNLSVKTTVNFIPKHANDTSSLEQFCKDTVITIWHYHGGCHVGKVVSPDYKVLDVDRLRVVDGSTFTESPGTNPQATVMMMGRYMGVKILRGRLGRLAGI* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0474 586 Pfam GMC oxidoreductase 425 569 IPR007867 GO:0016614
Mtr8g0474 586 SUPERFAMILY FAD/NAD(P)-binding domain 47 577 IPR036188 -
Mtr8g0474 586 Gene3D - 172 518 - -
Mtr8g0474 586 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 2 586 - -
Mtr8g0474 586 Gene3D - 55 568 IPR036188 -
Mtr8g0474 586 ProSitePatterns GMC oxidoreductases signature 1. 127 150 IPR000172 GO:0016614|GO:0050660
Mtr8g0474 586 PIRSF Alcohol_oxidase 34 583 IPR012132 GO:0050660
Mtr8g0474 586 PANTHER OSJNBA0019K04.7 PROTEIN 2 586 - -
Mtr8g0474 586 SUPERFAMILY FAD-linked reductases, C-terminal domain 323 525 - -
Mtr8g0474 586 Pfam GMC oxidoreductase 218 327 IPR000172 GO:0016614|GO:0050660
Mtr8g0474 586 Pfam GMC oxidoreductase 55 149 IPR000172 GO:0016614|GO:0050660
Mtr8g0474 586 ProSitePatterns GMC oxidoreductases signature 2. 286 300 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0474 Mtr-Chr8 5477853 5484765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0474 32 581 Miscellaneous Gene Families AT3G56060 51.444 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0474 K15403 - gmx:100788704 971.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3495 2 49074627 49080639 Mtr8g0474 8 5477853 5484765 PCT