Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0454 ATGACTAATAACATTGTTATTGTTTTTGATTTTGACAAAACGATCATTGATTGTGACAGTGATAATTGGTTGATTGATGAATTGGGTTTCACTGATTTGTTCAATCAACTCCTTCCTACAATGCCTTGGAATTCTGTTATGGACAAAATGATGATGGAGTTTCATTCAAATGGAATAACCATTGAAGAGATTGAAAAGGTTCTTCAAAGGATTCCAATTCATCACAGAATAATACCTGCAATTAAATCAGCTCATGCTTTAGGGTGTGATTTGAGGATTGTTAGTGATGCTAATATGTTTTACATTGAAACTATTTTGAAGCATTTAGGAATAAGTGAATACTTCACTGAGATTAACACTAATCCTGGTTATGTTAATCAAGAAGGAAGAGTTAGAATTTCACCTTACCATGATTTCAATAAGGCTTCACATGGTTGCAACAATGTTTGCCCTCCAAACATGTGCAAGGGTTTAATCATTGATAAAATTCAAAATTCAATTTTTGAAGAGGATAGCAAGAGGTTTATCTACCTTGGTGATGGTGCAGGGGACTATTGCCCTAGTTTGAGGCTTAGAGAAAGAGACTTTGTGATGCCAAGGAAGAATTTTCCAGTGTGGGATTTGATATGCAAAGATCCTTCACTTGTCAAAGCTGAAATTCATGGTTGGAGTGATGGAGAAGAATTGGAACAAGTTTTGATGAATTTGATTAACAAAATTATGATGGAGGAACATGTTCAATTTATTTCATCAGATTGCAAGCTACAAACTCTATCTAGTCCAGTACTTGTATCTTTGCCTAAAGCTGTCTCAGTTAGGCCATAG 825 0.3479 MTNNIVIVFDFDKTIIDCDSDNWLIDELGFTDLFNQLLPTMPWNSVMDKMMMEFHSNGITIEEIEKVLQRIPIHHRIIPAIKSAHALGCDLRIVSDANMFYIETILKHLGISEYFTEINTNPGYVNQEGRVRISPYHDFNKASHGCNNVCPPNMCKGLIIDKIQNSIFEEDSKRFIYLGDGAGDYCPSLRLRERDFVMPRKNFPVWDLICKDPSLVKAEIHGWSDGEELEQVLMNLINKIMMEEHVQFISSDCKLQTLSSPVLVSLPKAVSVRP* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0454 274 SUPERFAMILY HAD-like 5 189 IPR036412 -
Mtr8g0454 274 Gene3D - 1 190 IPR023214 -
Mtr8g0454 274 PANTHER INORGANIC PYROPHOSPHATASE 4 272 - -
Mtr8g0454 274 PANTHER PHOSPHATASE, ORPHAN 1, 2 4 272 IPR016965 GO:0016791
Mtr8g0454 274 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 189 - -
Mtr8g0454 274 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 201 IPR006384 GO:0016791
Mtr8g0454 274 Pfam Putative Phosphatase 5 237 IPR016965 GO:0016791
Mtr8g0454 274 PIRSF PLP_phosphatas_PHOSPHO2 1 241 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0454 Mtr-Chr8 5255004 5256415 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0454 K13248 - gmx:100785878 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0454 8 5255004 5256415 Mtr2g3512 2 49218803 49220860 PCT