Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0452 ATGTCTAATAATATTGTGATAGTTTTCGACTTCGATAAAACCATAATTGATTGTGATAGTGATAATTGGGTTGTTGATGAATTAGGTTTCACCGATTTGTTCAATCAACTCCTTCCCACTATGCCTTTCAATTCTCTCATGGACAGAATGATGATGGAGCTTCATTCAAATGGAAAAAGTATCGAAGATATTGAAAAAGTTCTTCAAAGGATACCAATTAATCACAGAATAATATCTGCTATTAAATCAGCTTATGCTTTGGGGTGTGATTTGAGGATTGTTAGCGATGCTAATACGATTTTCATTGACACAATTTTGAAGCATTTGGGAATTAGTGAATGCTTCTCTGAGATTAACACCAATCCTGGTTATGTTAATCAAGAAGGAAGATTAAAAGTTATGCCTTATCATGACTTCAACAAAGCTTCTCATGGTTGCACTCTTTGTCCCCCAAACATGTGCAAGGGTTTAATCATTGATAGAATCCAAAAATCAATTTCTGAAGTGGAGAAGAAGAGATTTATCTACCTTGGTGATGGTGCTGGGGACTATTGCCCTAGCTTGAGGCTTAGAGAAAGAGACTTTGTGATGCCAAGGAAGAATTTTCCAGTGTGGGATTTGATATGCAAAGATCCTTCACTTGTTAAGGCTGAAATTCATGGTTGGAGTGATGGAGAAGAATTGGAACAAGTTTTGATGAATTTGATTAACAAAATTATGATGGAGGAACATGTTCAATTCATTGCATCTGACTGCAAGCTAGCTACAAACTCTATTTGTTCCCGTTCACCAGTCATTGCCTAA 804 0.3619 MSNNIVIVFDFDKTIIDCDSDNWVVDELGFTDLFNQLLPTMPFNSLMDRMMMELHSNGKSIEDIEKVLQRIPINHRIISAIKSAYALGCDLRIVSDANTIFIDTILKHLGISECFSEINTNPGYVNQEGRLKVMPYHDFNKASHGCTLCPPNMCKGLIIDRIQKSISEVEKKRFIYLGDGAGDYCPSLRLRERDFVMPRKNFPVWDLICKDPSLVKAEIHGWSDGEELEQVLMNLINKIMMEEHVQFIASDCKLATNSICSRSPVIA* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0452 267 PANTHER INORGANIC PYROPHOSPHATASE 4 263 - -
Mtr8g0452 267 Pfam Putative Phosphatase 5 236 IPR016965 GO:0016791
Mtr8g0452 267 Gene3D - 1 189 IPR023214 -
Mtr8g0452 267 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 200 IPR006384 GO:0016791
Mtr8g0452 267 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 188 - -
Mtr8g0452 267 SUPERFAMILY HAD-like 5 188 IPR036412 -
Mtr8g0452 267 PANTHER PHOSPHATASE, ORPHAN 1, 2 4 263 IPR016965 GO:0016791
Mtr8g0452 267 PIRSF PLP_phosphatas_PHOSPHO2 1 240 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0452 Mtr-Chr8 5248141 5249392 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0452 K13248 - gmx:100785878 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0452 8 5248141 5249392 Mtr2g3513 2 49224152 49226344 ECH
Mtr8g3629 8 46884574 46887897 Mtr8g0452 8 5248141 5249392 ECH
Mtr8g0452 8 5248141 5249392 Mtr8g0452 8 5248141 5249392 ECH
Mtr8g0452 8 5248141 5249392 Mtr2g3513 2 49224152 49226344 PCT