Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0388 ATGGCCTCTTATAGGCCTTTCCCTCCTCCGGCGAGTCAAAACCCTATCGCACCACCACCTCCGCCGCCGCAACAACGGCCAAGTAATTGGGGTGGTTACGGTTACAGTGGTGTTGTTGAAATACCACCTCAAAATTCAAACTTTCAACATCACCAGCATCAAGTTCAGCATCATCATGTTCCTCATGCTCCTCCTCCACCGCCACCGTCGAATTATTATCCATATCAGCCACCGCCACCACCTCCTCCACCAGATAATTCGTATCAGCCACCACCACCGCCACCGGGTTCTATGTATTATCCTTCTAATAATAATCAATACAATCATCAACAACAGCAACAACAGCCACCACCACCACCTCCGCCACCAGGTTCTTCAATGCCACCTCCACCGCCTCCTCCAGCCTCGCCACCACCTCCTCCTCCGACAAAAAATGAAGTAGAGAGGGTAGACAATAAAGGGTCATTGGGTAAACGCGACCGCGATGGAGTTTCACATTCGCATAAACAGCATCAGAAGTCTTCTCATGCTCATCCTCCAAGGAGAGTTGAGACAGAGGAAGAGAAGAGAATGAGGAAGAAGAAGGAGTATGAGAAGCACAGGCAAGAGGAAAAGCATAGGCACCAGCAGAAGCAGTTGAAAGAATCACAGAATAGTGTGTTGCAAAAGACTCAGATGGTGTCATCTGGGGGAGCTGGAAAGGTGCACGGTTCAATTGCCGGGTCTCGAATGGGAGATAAGAGAGCTACTCCGTTGTTGGGTGGCGAGAGGGTTGAAAATAGGTTGAAAAAGCCTACAACTTTTTTGTGTAAGCTCAGGTTTCGAAATGAGCTTCCGGATCCAACTGCACAACCTAAGCTAATGGCATTCAAGAAAGATAAAGATCAATATGCAAAATATACAATAACATCTCTGGAGAAAATGTACAAACCCAAACTCTTTGTGGAGCCAGATCTAGGGATACCTCTGGACCTGCTTGATCTCAGTGTTTACAATCCTCCCAGTGTCCGCCCACCTCTTGCTCCTGAAGATGAAGATTTATTGCGAGATGATGAAGCTGTTACTCCTTTGAAAAAAGATGGTATTAAAAGAAAAGAGAGACCTACTGATAAAGGTGTAGCATGGCTTGTTAAAACACAATATATATCGCCTTTAAGCATGGAATCGGCCAAACAGTCCTTAACTGAAAAACAAGCTAAGGAGCTTAGAGAGAAGAAGGGAGGCCGCAGTCTTCTGGAAAATCTTAACAATAGGGATAGACGAATGAGGGAAATTGAAGCATCATTTGAAGCAGCTAAGTCACAACCTGTTCATGCAACTAAAAAAGAGTTGTATCCTGTTGAGTTTATGCCATTGTTGCCTGATTTTGATAGGTATGATGATCAGTTTGTCATTGCTGCATTTGATAATGCTCCAACAGTTGATTCAGAAGTGTACAATAAGTTGGACAAATCTGTTCGTGATATCTCTGAATCAAGGGCAGTAATGAAAAGTTATGTTGCAACAAGCTCAGATCCTGCAAATCCTGAGAAATTTTTGGCATACATGGTCCCACAACCAGGAGAGTTGTCAAAAGATATATATGATGAAGATGAAGACGTCTCTTATTCTTGGGTTCGCGAGTATCATTGGGATGTTCGAGGTGACGATGCAGATGACCCCACAACATTCTTAGTTTCATTTGATGAGTCAGAAGCTCGTTATTTGCCTCTTCCGACTAAACTTGTTTTAAGAAAAAAGAGGGCTAAAGAGGGAAGATCGGGCGATGAGGTTGAGCAATTTCCAGCTCCTTCTAGAGTGACTGTGAGGAGAAGACCAAACGTTGCTGCAATTGAGCTGAAGGATTCTGAGGTTTATACAAGGTTAAAGGGCAATTCATCAAAGAACCTAGACATGGATGACGATCTCGACGACCAACATGGGGATGCAGATCACCATGATAACTTCCAATCTAGTGGAGCAGAAGATGAAATGTCCGAATGA 1983 0.4433 MASYRPFPPPASQNPIAPPPPPPQQRPSNWGGYGYSGVVEIPPQNSNFQHHQHQVQHHHVPHAPPPPPPSNYYPYQPPPPPPPPDNSYQPPPPPPGSMYYPSNNNQYNHQQQQQQPPPPPPPPGSSMPPPPPPPASPPPPPPTKNEVERVDNKGSLGKRDRDGVSHSHKQHQKSSHAHPPRRVETEEEKRMRKKKEYEKHRQEEKHRHQQKQLKESQNSVLQKTQMVSSGGAGKVHGSIAGSRMGDKRATPLLGGERVENRLKKPTTFLCKLRFRNELPDPTAQPKLMAFKKDKDQYAKYTITSLEKMYKPKLFVEPDLGIPLDLLDLSVYNPPSVRPPLAPEDEDLLRDDEAVTPLKKDGIKRKERPTDKGVAWLVKTQYISPLSMESAKQSLTEKQAKELREKKGGRSLLENLNNRDRRMREIEASFEAAKSQPVHATKKELYPVEFMPLLPDFDRYDDQFVIAAFDNAPTVDSEVYNKLDKSVRDISESRAVMKSYVATSSDPANPEKFLAYMVPQPGELSKDIYDEDEDVSYSWVREYHWDVRGDDADDPTTFLVSFDESEARYLPLPTKLVLRKKRAKEGRSGDEVEQFPAPSRVTVRRRPNVAAIELKDSEVYTRLKGNSSKNLDMDDDLDDQHGDADHHDNFQSSGAEDEMSE* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0388 660 MobiDBLite consensus disorder prediction 177 213 - -
Mtr8g0388 660 Pfam Paf1 268 642 IPR007133 GO:0006368|GO:0016570|GO:0016593
Mtr8g0388 660 PANTHER RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG 244 656 IPR007133 GO:0006368|GO:0016570|GO:0016593
Mtr8g0388 660 MobiDBLite consensus disorder prediction 60 99 - -
Mtr8g0388 660 MobiDBLite consensus disorder prediction 8 27 - -
Mtr8g0388 660 MobiDBLite consensus disorder prediction 113 145 - -
Mtr8g0388 660 MobiDBLite consensus disorder prediction 146 169 - -
Mtr8g0388 660 PANTHER RNA POLYMERASE II ASSOCIATED FACTOR PAF1-RELATED 244 656 - -
Mtr8g0388 660 MobiDBLite consensus disorder prediction 622 653 - -
Mtr8g0388 660 Coils Coil 183 219 - -
Mtr8g0388 660 MobiDBLite consensus disorder prediction 1 258 - -
Mtr8g0388 660 MobiDBLite consensus disorder prediction 622 660 - -
Mtr8g0388 660 MobiDBLite consensus disorder prediction 214 231 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0388 K15174 - gmx:100800148 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0388 8 4441400 4447806 Mtr8g0388 8 4441400 4447806 ECH