Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0359 ATGAGCAGCACTACTCTACCTTCCGTTCCACCCCAAGATGCATGGACCCTCACTTCCCACAAACTTCTCCCTCGCTGGATTTCCCTCTCTCACCAGTCAACTATTCCTATTTCTATATCAAGAGTCAACCAAGTTGATGCTGCAAGATTGGATATTGAAATGTCAGCTATGTTGAAAGAACAATTGGTTAAAGTCTTCACTTTGATGAAGCCAGGAATGTTATTTCAGTATGAAGCGGAGCTTGATGCTTTCCTTGAGTTTCTTATTTGGAGGTTCTCAATTTGGGTGGATAAACCAACTCCCGGTATTGCTCTCATGAATCTGAGGTATAGAGATGAGCGCGCAGTTGAGTCAAGGGACAAAGTAAGAACTGGTCTGGAGGGACCTGGACTCACTGTTGCTCAGAAGCTTTGGTATTGTATTGCCACTGTTGGTGGTCAGTATATTTGGGCTCGCTTACAATCGTTCTCTGCATTTCGTAGGTGGGGTGATACTGAGCAGAGACCATTGGCACGGCGTTTATGGATCTTGATACAAAGAATAGAAGGGATTTATAGAGCTGCTTCATTTGGAAACCTGTTGATATTTCTTTGCACGGGAAGATATCGAAATCTTATTGAAAGAGTCTTGCGAGCTAGGCTTGTATATGGGAGCCCAAATATGAACCGTGCTGTTAGCTTTGAGTATATGAACCGACAATTAGTTTGGAATGAATTCTCGGAAATGTTATTGTTGCTTCTTCCTCTTCTAAATTCATCATCGGTGAAAAATCTCCTCCGGCCTTTTTCTAAGGATAAATCATCAAGTTCGGGTGAGGATAGCACTGCATGTCCCATATGCCAGGCTACTCCAATCATTCCCTTTGTTGCTCTACCTTGTCAGCACAGATATTGTTACTACTGTCTTCGAACACGATGTGCTGCTGCCCCATCATTTAGGTGTTTGAGGTGCAACGAGCCAGTAGTTGCTATGCAACGCCATGGTGGTGTCTCCACGGAGTAA 1002 0.4381 MSSTTLPSVPPQDAWTLTSHKLLPRWISLSHQSTIPISISRVNQVDAARLDIEMSAMLKEQLVKVFTLMKPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAVESRDKVRTGLEGPGLTVAQKLWYCIATVGGQYIWARLQSFSAFRRWGDTEQRPLARRLWILIQRIEGIYRAASFGNLLIFLCTGRYRNLIERVLRARLVYGSPNMNRAVSFEYMNRQLVWNEFSEMLLLLLPLLNSSSVKNLLRPFSKDKSSSSGEDSTACPICQATPIIPFVALPCQHRYCYYCLRTRCAAAPSFRCLRCNEPVVAMQRHGGVSTE* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0359 333 SUPERFAMILY RING/U-box 272 323 - -
Mtr8g0359 333 Pfam Pex2 / Pex12 amino terminal region 53 255 IPR006845 -
Mtr8g0359 333 CDD RING-HC_PEX2 276 318 - -
Mtr8g0359 333 PANTHER - 2 332 - -
Mtr8g0359 333 ProSiteProfiles Zinc finger RING-type profile. 277 318 IPR001841 -
Mtr8g0359 333 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 251 329 IPR013083 -
Mtr8g0359 333 ProSitePatterns Zinc finger RING-type signature. 293 302 IPR017907 -
Mtr8g0359 333 Pfam Zinc finger, C3HC4 type (RING finger) 277 317 IPR018957 GO:0046872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0359 K06664 - gmx:100805856 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0359 8 4073248 4077248 Mtr8g0359 8 4073248 4077248 ECH