Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0344 ATGTATGCTGATCGGGTGGAAAGTGGAGCAAGGAGGTCTGTCAAAGAGCGTCTGGATGGAAGCATCAGTGTGTCTACTCGGAATCAGCGTCAAGTTACTGGCAAAAGGCCGAGGCAAGATGACAAGTGGGAACACGATCTTTATAATGATGATGTTGAACAAGAACAACCGCGTACCACTAATCGCAAAGTTACTGGTCAAGATCTCCGTGTTAAGCTTCAAAAGAAAGGTCTTCAACCTGCAACTCGGAGTGGAAAGAGTTCTACCCCAAGCACCAGGGATCTTCGTGAAAGACTATCAGGGACAATGAATACACAACCTAAAAACTCCGACCCACCAAAGTCAAAAGTGATTGCTAAACCGAGCAGTAAAAGTGTTGGTGCTGAGGCTCCTGCAGTCAAAAGACCAGCTAACCCAGCTCCTAAAAAGGCCCGGAAGGCTGGTACTACAGTGGATGAATTTTTGCTGACCTTGGGTCTCGAAAAGTATCTCATAACTTTTCAGGCTGAAGAAGTTGATATGACAGCTCTCAAACATATGACTGATGAGGACCTCAAGGTTATGGGTATACCAATGGGGCCAAGAAAGAAGATACTTTTAGCGTTGGAGTCAAAAGTCTGA 621 0.4541 MYADRVESGARRSVKERLDGSISVSTRNQRQVTGKRPRQDDKWEHDLYNDDVEQEQPRTTNRKVTGQDLRVKLQKKGLQPATRSGKSSTPSTRDLRERLSGTMNTQPKNSDPPKSKVIAKPSSKSVGAEAPAVKRPANPAPKKARKAGTTVDEFLLTLGLEKYLITFQAEEVDMTALKHMTDEDLKVMGIPMGPRKKILLALESKV* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0344 206 MobiDBLite consensus disorder prediction 80 112 - -
Mtr8g0344 206 Pfam SAM domain (Sterile alpha motif) 150 203 IPR001660 GO:0005515
Mtr8g0344 206 MobiDBLite consensus disorder prediction 1 147 - -
Mtr8g0344 206 SMART SAM_4 143 206 IPR001660 GO:0005515
Mtr8g0344 206 PANTHER OSJNBA0060P14.15 PROTEIN 128 192 - -
Mtr8g0344 206 PANTHER OSJNBA0060P14.15 PROTEIN 1 118 - -
Mtr8g0344 206 MobiDBLite consensus disorder prediction 33 58 - -
Mtr8g0344 206 Gene3D - 148 206 IPR013761 -
Mtr8g0344 206 SUPERFAMILY SAM/Pointed domain 149 203 IPR013761 -
Mtr8g0344 206 ProSiteProfiles SAM domain profile. 146 206 IPR001660 GO:0005515
Mtr8g0344 206 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 118 - -
Mtr8g0344 206 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 128 192 - -
Mtr8g0344 206 MobiDBLite consensus disorder prediction 1 18 - -
Mtr8g0344 206 CDD SAM_superfamily 151 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0344 Mtr-Chr8 3908193 3914085 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0344 38 205 Glycosyltransferase AT3G07170 57.988 4.88e-60 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0344 - - gmx:100784706 276.944