Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0340 ATGGCACAACGTACTCATGTACCAAAATTTGGCAATTGGGAGAGTAATGATAATGTTCCTTATACAGCATATTTTGACAAGGCACGGAAAGGTCGAACTGGCACAAAGATGATAAACCCGAATGACCCTGAAGAAAATGTCGATTTAGTTCTTGATAATTCATCGTCTGATCATCCACCTCCTTCCAATACCAAACCCAGAGCCAATTCAGAGGATCTATCTGGAAAGGGATTGGTGCGATCAACAATTGAGTCGCATAAAAGTCTTGATGGTGATCCTAAGCAATATGTTGACTCTCCGGCTCGCCATGACAATGCAAGCAATAGGAGTTCCAATGATTCTACACCTCGTCTTGGAGTAGGTTCTGCTGATAACCGACGAAGACCTTCAAGACAAAGTACTGCTGGGTCTGAGCACAGCGTTGAACGGTCACCCCTTCATCGTCAGGCTAGAGCTCCTGCTGGAAGAGATAGTCCCTCTTGGGAAGGAAAGAATAATTCCTATGACAGCAGCCATGGTACACCGGGAAGATCTCGATTAAGACCAGCTAATCGAGGGGATGAAACTCCTGATAAAGGTGCAGCTGTTCCAAAGTTTGGTGATTGGGATGTGAGTAACCCTGCATCAGCTGATGGCTATACTCACATTTTCAATAAAGTGAGAGAGGAGAGACAGGGTGGGGCCGGACATGCACCTGGCACACCTAATGAGAGGCCGCATGTTATCCGCAACCAAAATAATGACAAAGCTCAGTGTTGCTGCTTTGCTTGGGGCAAAAAGTGA 783 0.4598 MAQRTHVPKFGNWESNDNVPYTAYFDKARKGRTGTKMINPNDPEENVDLVLDNSSSDHPPPSNTKPRANSEDLSGKGLVRSTIESHKSLDGDPKQYVDSPARHDNASNRSSNDSTPRLGVGSADNRRRPSRQSTAGSEHSVERSPLHRQARAPAGRDSPSWEGKNNSYDSSHGTPGRSRLRPANRGDETPDKGAAVPKFGDWDVSNPASADGYTHIFNKVREERQGGAGHAPGTPNERPHVIRNQNNDKAQCCCFAWGKK* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0340 260 MobiDBLite consensus disorder prediction 101 119 - -
Mtr8g0340 260 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 257 IPR040387 -
Mtr8g0340 260 MobiDBLite consensus disorder prediction 48 70 - -
Mtr8g0340 260 MobiDBLite consensus disorder prediction 126 140 - -
Mtr8g0340 260 MobiDBLite consensus disorder prediction 83 99 - -
Mtr8g0340 260 MobiDBLite consensus disorder prediction 160 174 - -
Mtr8g0340 260 MobiDBLite consensus disorder prediction 28 244 - -
Mtr8g0340 260 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE-RELATED 1 257 - -
Mtr8g0340 260 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 190 225 IPR008700 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0340 Mtr-Chr8 3856627 3860400 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0340 K13456 - gmx:100808509 379.793