Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0329 ATGGTTGAAGTTGAAGAGATTGAGCTTGATTTAGGTTTATCAATAGGGGGAGCTTTCAAGAAATCCAAACCTGAATCACGACCTGATAAATTAATATCATTAGGTCATGACGTTGGTTTGGAACAAAATCAACAACCACAAATGAAACGTGAGATTCAAGCATTGAGGAGAATGGAGGTGAAGAGAAAAAGAGTGCAGAAAAGAGAGACATGTCTCGAGACCGGAGACCTGAAGCCGGAATGTGAGCAGGTGTTTAAAAGGGAGAAGACGGATATTGTTGACGGTGTTGTTTCGTGGATGACACCGTTACAGGTTGTTCAACGGCCGCAACAATATGAAACTTTGCGGTATAGATTATCGTTACCATTTTCGTTTGGGAGTGAAAAGAATGAAGGAAGAATTAACGGTGTTGGTTTTAACGGCGGAGATGGAAAAGTCAAATCTAATGGGTCTTCTAGGTGTTCTTCTGCTATTTCTGATTATCAAAGCTCTTCTCCTGAAGATGGAGGGAGCACCGAAAGCCGCAGCCGCAGCCATTCAGCTAATTCATTTGCAGAACCAACTCATTTGAAGGAAACAATCCAAACTCAACCAAATGGCATAAAACTTAATGAACAATCTGCTGCAGCGGCAACAAAAACCGATCAAATTCCAATTCCAATTAAGAAGTCTTTGCCTCAAATGCCATATGTATCCACAAAAGGGAATGGATCAAATGGGAAAGTAGTGAATGGATTTTTATACAGATATTCAAAATGTGATGAAGTTAGCATTGTTTGTGTCTGTCATGGAAGCACATTTTCACCTGCTGAGTTTGTGCAGCATGCTGGAGGCACTGACATTACACACCCTCTTAGACATATCACAGTAAATTCTTCTGCTTTTAGCTGA 891 0.4063 MVEVEEIELDLGLSIGGAFKKSKPESRPDKLISLGHDVGLEQNQQPQMKREIQALRRMEVKRKRVQKRETCLETGDLKPECEQVFKREKTDIVDGVVSWMTPLQVVQRPQQYETLRYRLSLPFSFGSEKNEGRINGVGFNGGDGKVKSNGSSRCSSAISDYQSSSPEDGGSTESRSRSHSANSFAEPTHLKETIQTQPNGIKLNEQSAAAATKTDQIPIPIKKSLPQMPYVSTKGNGSNGKVVNGFLYRYSKCDEVSIVCVCHGSTFSPAEFVQHAGGTDITHPLRHITVNSSAFS* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0329 296 PANTHER NUCLEAR TRANSPORT FACTOR 2/RNA RECOGNITION MOTIF PROTEIN 199 295 - -
Mtr8g0329 296 PANTHER NUCLEAR TRANSPORT FACTOR 2/RNA RECOGNITION MOTIF PROTEIN 2 119 - -
Mtr8g0329 296 PANTHER AFP HOMOLOG 2 2 119 IPR031307 GO:0007165
Mtr8g0329 296 PANTHER AFP HOMOLOG 2 199 295 IPR031307 GO:0007165
Mtr8g0329 296 MobiDBLite consensus disorder prediction 130 199 - -
Mtr8g0329 296 Pfam Ethylene-responsive binding factor-associated repression 3 24 IPR012463 -
Mtr8g0329 296 Coils Coil 48 68 - -
Mtr8g0329 296 MobiDBLite consensus disorder prediction 145 199 - -
Mtr8g0329 296 Pfam Tify domain binding domain 256 291 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0329 Mtr-Chr8 3602819 3604485 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0329 - - mtr:MTR_8g012620 588.571