Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0328 ATGGAGTTTGACTACCGCACTGTGATGGATCTGTTATATTTCTTGTTGACATTAATGATTATATGGTTGATGAGGTTCAGGTTGAAATCATCCTATATCAAGGAGTTTGACACCATGTGGTTATCCTTTTTGGTGGTGCCTTCTGCAATTTTGGCAGTACTAATAAATCCAGCTACACCTCATATGTGGATTGTTCGAGTCCTTTTTGCATTTACTATGTATTTGGAAACTGTTTCAGTACTTCCTCAAATTCGTTATATGCAAAATGCAAAGATGGTTGAAACATTCACAGGTTATTATGTATTTGCTCTTGGTGTTTCAAGATTTTTTTCACTGGCTTATTGGATTATTCATGTTTATGAAAGTGGAGGGAGGTATCTATTTTTCTTTGGCTATGGCTATTTTTGGATGGTCGTTCTTCAAGTATTAGAGTTGGTCCAGTCTTTCATTTTGGCAGACTTTTGTTACTATTACATCAAGAGCTTCATGCAAGGGCAACTTTTGAGGAAGATGCCTGTTTAA 522 0.3621 MEFDYRTVMDLLYFLLTLMIIWLMRFRLKSSYIKEFDTMWLSFLVVPSAILAVLINPATPHMWIVRVLFAFTMYLETVSVLPQIRYMQNAKMVETFTGYYVFALGVSRFFSLAYWIIHVYESGGRYLFFFGYGYFWMVVLQVLELVQSFILADFCYYYIKSFMQGQLLRKMPV* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0328 173 Pfam ER lumen protein retaining receptor 5 117 IPR000133 GO:0006621|GO:0016021|GO:0046923
Mtr8g0328 173 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 172 IPR000133 GO:0006621|GO:0016021|GO:0046923
Mtr8g0328 173 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0328 Mtr-Chr8 3599948 3601486 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0328 1 173 Miscellaneous Gene Families AT3G25160 54.913 2.09e-67 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0328 - K10949 gmx:100790733 240.35