Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0327 ATGGGATCAAAGAGGGATTCCCCTGTGAATGTTTTGTCTATATGGTTGAGGAAGAGATCAATGAAAGTGAAAATCTTTTTGGGAATATTGCTTGCATTTTCTGCTTTGGTGGCTCTAAAGTTTACCATCAGAGATCCAAATTTTTTCTTCCAAGTATCTGAAACAATCCATATCGTTGGCCTTATTGTCCTCATATACAAGCTCTATGCTCAGAAGACTTGCTCTGGTTTATCCCTCAAGAGCCAAGAGATCACAGCTTTATTCCTAACAATAAGGTTAGGTGTTAGCGCCTATATGGAAGCTAACATTCACACTGTGTTGGATCTGATATATCTCTTGTCAACATTACTGGTTATTTGGTTGATAAGATTTAAGCTGAAGTCATCTTATATGAAGGAGTTTGATAACATGTGGTTATCCTTTTTGGTGGTGCCATCTGCAATTTTAGCAATATTTATCCACCCATTTACAAGACATGTTTGGATAGCCAGGGTTCTATGGGCGTTCACCGTATATGTGGAAGCTATTTCAATACTTCCTCAACTTCGTTATATGCAAAATGCAAAGATGGTTGAAACATTTACAGGATATTATGTATTTGCTCTTGGTGTCTCAAGATTTGTATCATTGGCTTATTGGATTATTCATACCTATGAAACTGGAGGGAAATATCTATTTTTGTTTGGCTATGGCTATTTATGGATGTTGGCAGCTCTTTTAACAGAGGTGATTCAGTCTTTCATCTTGGCAGACTTTTGTTACTATTATATGAAGAGCTTCATGCAAGGGCAGCTTTTGAAGAAGATGCCTGTTTAA 816 0.3701 MGSKRDSPVNVLSIWLRKRSMKVKIFLGILLAFSALVALKFTIRDPNFFFQVSETIHIVGLIVLIYKLYAQKTCSGLSLKSQEITALFLTIRLGVSAYMEANIHTVLDLIYLLSTLLVIWLIRFKLKSSYMKEFDNMWLSFLVVPSAILAIFIHPFTRHVWIARVLWAFTVYVEAISILPQLRYMQNAKMVETFTGYYVFALGVSRFVSLAYWIIHTYETGGKYLFLFGYGYLWMLAALLTEVIQSFILADFCYYYMKSFMQGQLLKKMPV* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0327 271 PRINTS ER lumen protein retaining receptor signature 49 68 IPR000133 GO:0006621|GO:0016021|GO:0046923
Mtr8g0327 271 PRINTS ER lumen protein retaining receptor signature 76 96 IPR000133 GO:0006621|GO:0016021|GO:0046923
Mtr8g0327 271 PRINTS ER lumen protein retaining receptor signature 167 187 IPR000133 GO:0006621|GO:0016021|GO:0046923
Mtr8g0327 271 PRINTS ER lumen protein retaining receptor signature 189 203 IPR000133 GO:0006621|GO:0016021|GO:0046923
Mtr8g0327 271 PRINTS ER lumen protein retaining receptor signature 203 221 IPR000133 GO:0006621|GO:0016021|GO:0046923
Mtr8g0327 271 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 270 IPR000133 GO:0006621|GO:0016021|GO:0046923
Mtr8g0327 271 Pfam ER lumen protein retaining receptor 73 215 IPR000133 GO:0006621|GO:0016021|GO:0046923
Mtr8g0327 271 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 1 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0327 Mtr-Chr8 3590120 3594695 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0327 1 271 Miscellaneous Gene Families AT3G25160 58.088 1.94e-112 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0327 - K10949 gmx:100790733 379.407