Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0321 ATGGCTTTGAATTTGCCCTCCCCAGCTCAAGTGAAACCCTCATTTTTCTCTGATATCATCAACCCAGTTATCACCCCCACAAAACTTCCAGGTAGCTTTGCATTGAAGAGAAAAGAGGGTGACACAAAAGTAGTAAAGAGAAGAGTTTATTGCTCAGCAGCACACTCACCACAACCAGCTTGGCCTGGAACAGCTATTCCTGAACCTAGTGATTTTAAAACATGGGATGGACCAAAACCCATCTCTGTCTTAGGTTCAACTGGTTCAATTGGAACTCAGACACTGAATATAGTGGCAGAGTTTCCAGAAAGATTTAGAGTTGTGGGGCTTGCAGCTGGTTCAAATGTTACTCTTCTTGCTGAACAGGTAAGGATATTTAAGCCTGAGTTAGTAGCTCTTAGAGATGAGTCTAAAATCGATGAGCTCAAAGAGGCTTTGGCTGGTATTGATCACAAACCTGAAATCATCCCTGGGGAGCAAGGAGTCATTGAGGTTGCTCGTCACCCTGATGCCGCCACAGTAGTTACAGGAATAGTTGGTTGTGCAGGATTGAAGCCAACAGTGGCGGCGATTGAAGCAGGGAAAGACATAGCATTAGCTAACAAAGAGACAATGATTGCTGGAGGCGCTTTTGTTCTTCCTCTTGCTCACAAGAATAACATCAAAATTCTTCCGGCAGATTCAGAACATTCTGCCATTTTTCAGTGTATCCAAGGGTTGCCAAAGGGTGCACTTAGGAAAATCCAATTAACTGGTTCTGGAGGTGCTTTCAGAGAGTGGCCTGCTGAAAAGATGAAAGACATTAAGCTTAAGGATGCATTAAAGCATCCCATTTGGAGTTTGGGAAGAAAGATAACAATTGATTCTGCTACCCTTTTCAATAAGGGTTTAGAAGTAATTGAAGCACATTACTTGTTTGGAGCAGAATATGATGATATTGAGATTGTTATTCATCCACAATCTATCATACATTCATTAGTTGAAACACAGGATTCTTCTGTTATTGCACAGTTGGGATTACCTGACATGCGGTTGCCACTCCTTTATACTTTGTCATGGCCAGAAAGAGTCTATTGTTCTGAAATTACTTGGCCTCGCCTTGATCTTACCAAGTATGGTACTCTAACATTTCAAGCTCCAGACACTAAGAAGTTTCCATCAGTGAATCTTTGCTATGCTGCCGGACGTGCTGGAGGCACCATGACCGGAGTTCTTAGTGCTGCAAACGAGATAGCTGTCGAACTGTTTGTTGCAGAAAAGATAAGCTATCTAGATATTTTCAAGATTGCAGAGCTAACATGTAATGAACATCAAAAAGAATTGGTAACATCTCCAACACTTGAAGAAATTCTTCACTATGATCAATGGGCAAGACAATATGCTGCTGGTTTGCAAAAAGCTTTAAGTGTTTGA 1413 0.4161 MALNLPSPAQVKPSFFSDIINPVITPTKLPGSFALKRKEGDTKVVKRRVYCSAAHSPQPAWPGTAIPEPSDFKTWDGPKPISVLGSTGSIGTQTLNIVAEFPERFRVVGLAAGSNVTLLAEQVRIFKPELVALRDESKIDELKEALAGIDHKPEIIPGEQGVIEVARHPDAATVVTGIVGCAGLKPTVAAIEAGKDIALANKETMIAGGAFVLPLAHKNNIKILPADSEHSAIFQCIQGLPKGALRKIQLTGSGGAFREWPAEKMKDIKLKDALKHPIWSLGRKITIDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSLVETQDSSVIAQLGLPDMRLPLLYTLSWPERVYCSEITWPRLDLTKYGTLTFQAPDTKKFPSVNLCYAAGRAGGTMTGVLSAANEIAVELFVAEKISYLDIFKIAELTCNEHQKELVTSPTLEEILHYDQWARQYAAGLQKALSV* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0321 470 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 78 227 IPR036291 -
Mtr8g0321 470 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain 223 306 IPR013644 GO:0005515
Mtr8g0321 470 SUPERFAMILY 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 371 464 IPR036169 -
Mtr8g0321 470 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE 1 470 - -
Mtr8g0321 470 PIRSF Dxp_reductoisomrs 78 469 IPR003821 GO:0008299|GO:0030604|GO:0046872
Mtr8g0321 470 TIGRFAM Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 79 461 IPR003821 GO:0008299|GO:0030604|GO:0046872
Mtr8g0321 470 Hamap 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 81 464 IPR003821 GO:0008299|GO:0030604|GO:0046872
Mtr8g0321 470 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE 1 470 IPR003821 GO:0008299|GO:0030604|GO:0046872
Mtr8g0321 470 Pfam DXP reductoisomerase C-terminal domain 338 459 IPR026877 -
Mtr8g0321 470 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase 81 209 IPR013512 GO:0070402
Mtr8g0321 470 Gene3D - 383 467 - -
Mtr8g0321 470 Gene3D - 72 227 - -
Mtr8g0321 470 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 203 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0321 Mtr-Chr8 3544044 3549810 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0321 K00099 - gmx:100805316 813.142