Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0314 ATGAAAGCAATAGCTATGGTTGTGATTTTTCTATTTGTCTTCTCTTCCTTATTCACTATATCAAGTGCAGAAATCTCAGGACAACCGGGAGTGAACTATGGACAACTAGGAAACAACCTTCCAACACCAACAACCTCAGTGTCTCTCATCAAAAACCTCAAAGCCAAGCGTGTCAAAATCTATGACGCAAATCCACAAATCCTCAAAGCCCTCGAAAACACTGGAATCCAAGTATCCATCATGCTCCCCAATGAACTTGTAACAAATGTATCCTCAAACCAAACACTTGCAAATCAATGGGTCCAAACTAACCTCGTACCCTTCTACTCAAAAACACTCATTCGTTATCTTCTTGTTGGTAATGAACTCATTTCCTCAACAACAAACCAAACATGGCCCCACATTGTACCTGCCATGTACAGAATGAAACACTCCTTAACTATCTTTGGTTTGCATAAAGTCAAAGTTGGAACACCTTTGGCAATGGATGTTTTACAAACATCATTTCCACCTTCAAATGGCACATTTAGAAATGACATTGCGTTGAGTGTTATGAAACCAATGTTAGAGTTTTTACATGTCACAAACTCTTTTTTCTTCTTAGATGTGTATCCATTTTTTGCTTGGACATCAGATCCTATTAATATTAACTTGGATTATGCTCTTTTTGAATCCGATAACATCACGGTTACGGATTCGGGTACGGGTTTGGTTTATACTAATTTGTTTGATCAGATGGTGGATGCGGTTTATTTTGCAATGGAGCGGCTTGGCTATCCGGATATTCAAATATTTATCGCTGAAACCGGTTGGCCTAATGATGGTGACTTGGACCAAATTGGTGCAAATATTCACAATGCCGGTACATATAATAGAAATTTCGTGAAAAAGGTTACGAAAAAACCTCCGGTTGGGACACCGGCTCGACCTGGTTCAATTCTTCCATCTTTTATATTTGCTTTGTATAATGAGAATTTGAAAACGGGTTTGGGTACGGAGCGTCACTTCGGGTTATTGTATCCAAATGGGTCACGTATTTATGAGATTGACCTTTCTGGAAAGACGCCAGAGTACGAATATAAGCCATTGCCGCCACCAGATGATTATAAAGGGAAGGCGTGGTGTGTGGTGGCAGAGGGAGCTAACAAGACGGCAGTAGTGGAAGCATTGTCATATGCTTGCTCACAGGGGAACCGAACATGTGAATTGGTTCAACCCGGAAAACCCTGTTTCGAACCCGATTCAGTTGTTGGTCATGCTAGCTATGCGTTTAGTTCTTACTGGGCTCAGTTTAGGCGTGTAGGTGGGACTTGTAACTTCAATGGTCTCGCCACTCAAATTGCAGAGGATCCAAGTTATGGATCTTGCAAATACCCAAGTGTGATTCTTTGA 1392 0.4102 MKAIAMVVIFLFVFSSLFTISSAEISGQPGVNYGQLGNNLPTPTTSVSLIKNLKAKRVKIYDANPQILKALENTGIQVSIMLPNELVTNVSSNQTLANQWVQTNLVPFYSKTLIRYLLVGNELISSTTNQTWPHIVPAMYRMKHSLTIFGLHKVKVGTPLAMDVLQTSFPPSNGTFRNDIALSVMKPMLEFLHVTNSFFFLDVYPFFAWTSDPININLDYALFESDNITVTDSGTGLVYTNLFDQMVDAVYFAMERLGYPDIQIFIAETGWPNDGDLDQIGANIHNAGTYNRNFVKKVTKKPPVGTPARPGSILPSFIFALYNENLKTGLGTERHFGLLYPNGSRIYEIDLSGKTPEYEYKPLPPPDDYKGKAWCVVAEGANKTAVVEALSYACSQGNRTCELVQPGKPCFEPDSVVGHASYAFSSYWAQFRRVGGTCNFNGLATQIAEDPSYGSCKYPSVIL* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0314 463 SUPERFAMILY (Trans)glycosidases 30 350 IPR017853 -
Mtr8g0314 463 Gene3D - 369 460 - -
Mtr8g0314 463 Pfam X8 domain 374 445 IPR012946 -
Mtr8g0314 463 PANTHER BNAC03G35190D PROTEIN 15 455 - -
Mtr8g0314 463 ProSitePatterns Glycosyl hydrolases family 17 signature. 262 275 IPR000490 GO:0004553|GO:0005975
Mtr8g0314 463 Gene3D Glycosidases 29 359 - -
Mtr8g0314 463 Pfam Glycosyl hydrolases family 17 30 350 IPR000490 GO:0004553|GO:0005975
Mtr8g0314 463 SMART X8_cls 373 458 IPR012946 -
Mtr8g0314 463 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 15 455 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0314 Mtr-Chr8 3444222 3447580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0314 25 463 Glycoside Hydrolase AT3G23770 53.933 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0314 - - ccaj:109805358 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0314 8 3444222 3447580 Mtr8g0314 8 3444222 3447580 ECH