Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0294 ATGAGTTATTCTTCTTCCTCCAATCCTGGATGGATACACGATGTGTTCATCAATTTTAGAGGGAAAGATACTCGCAAGACTTTTGTTTCTCATCTCTATGCTGCTCTCACAAATGCTGGAATCAACACTTACATCGACCGCATGCTTCACAAGGGAACCGAGTTGGGACCAGAACTATTGGCAACAATAGAAAGGTCTCACATATCTATCCTTGTTTTCTCCAAAAGATATACAGAATCTAGTTGGTGTCTTCAAGAGCTAGATAAAGTCATGGAATGTCACAGAACTCATGGCCAGGTGGTTGTGCCCATATTTTACAATGTTGACCCCTCGGTTTTGCGTCATCATAAGGGTGCTTTCGGGAAAGCTTTGCAATCAACTGCTAGAAAATTATACTCAGAAAGAGAATTGAGGGAAAAGGCTCTGTTGAGTTGGAAGAATGCACTCACTCAAGCTTCAAATTTGTCTGGTTGGGATGTCACCAATTATAGGTAA 495 0.4121 MSYSSSSNPGWIHDVFINFRGKDTRKTFVSHLYAALTNAGINTYIDRMLHKGTELGPELLATIERSHISILVFSKRYTESSWCLQELDKVMECHRTHGQVVVPIFYNVDPSVLRHHKGAFGKALQSTARKLYSERELREKALLSWKNALTQASNLSGWDVTNYR* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0294 164 PANTHER TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN FAMILY PROTEIN 4 162 - -
Mtr8g0294 164 PANTHER TMV RESISTANCE PROTEIN N-LIKE 4 162 - -
Mtr8g0294 164 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 158 IPR035897 -
Mtr8g0294 164 Pfam TIR domain 13 152 IPR000157 GO:0007165
Mtr8g0294 164 SMART till_3 12 155 IPR000157 GO:0007165
Mtr8g0294 164 Gene3D - 7 164 IPR035897 -
Mtr8g0294 164 ProSiteProfiles TIR domain profile. 11 164 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0294 Mtr-Chr8 3202508 3203002 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0294 15 158 Miscellaneous Gene Families AT4G19920 36.552 2.35e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0294 - - mtr:MTR_8g011725 243.432