Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0280 ATGGAGTTTATCCAGAGCCGAGTGGAGCCATGGATGAGAGAACAAGGAGCTCGGTTGATGAAGGTATCGTGGGTCCCACTCCAATGGCGGATGAGATGGCCATGGACTAACCACCGTGAGCAGAAGAAACGGATCAAGGAAGAGTACCAACGGCGTCGTAAACAGCTCAATGATCTCTGTCTCGCTCTTAAGACTGATTCTCTCTCCGATTTGCAGGATCTTCTTTGTTGCATGGTTCTCTCTGAATGCGTTTACAAGAGGCCTGCTACTGAGATGATTCGAGCTGTAAATAGATTTAAGGCCGATTTTGGAGGACAAATTGTTGCTTTGGAGCGGGTGCAACCTTCATCAGATCATGTTCCTCATAGGTATTTATTGGCAGAGACAGGGGATACTTTATTTGCTTCCTTTATAGGAACAAAGCAATACAAGGATGTGATTGCTGATGCGAATATACTTCAAGGTGCAATCTTTCACGAGGATGCTGCTGAGGAATCCGACGGACATGTAGCAACTGAATCTGACAAGGGTGAAAACCAAAGTGGAAAAGAATATATGTGGAATCCTCTAGAATCCAGGTCTAAACAAATGAAGAGTAAATATAAACCTGCTGCCCATAGGGGTTTCATGGCCCGTGCTAAAGGAATACCTGCATTAGAATTGTACAGACTTGCTCAAAAGAAGAAACGCAAACTTGTTTTGTGTGGTCATTCACTTGGAGGAGCTGTAGCTGCATTAGCCACTCTTGCCATTTTGAGAGTAATTGCTGCTTCATCTTCATCAAAGGAAAATGGGAATGTCTCAGTCAAATGTATTACATTTTCTCAACCTCCTGTTGGAAATGCTGCTTTGAAGGACTACATTAATAGAAAAGGTTGGCAGCATTATTTCAAGAGTTATTGCATCCCAGAGGATTTGGTTCCTCGTATTTTATCTCCAGCATATTTTAGCCATTATAATGCTCAGTCTGTCCCAGTGCCTTCTGAAAATGAAAGTAACAGCTTATTATCAAGAGAACAGGAGGAAGGGGTAGCAAAGCGAAAAGGCAATGATGGAGAACAGTTGGTTTTGGGAGTAGGTCCCGTGCAGAGATCCTTCTGGAGACTCTCAAGACTAGTCCCTTTAGAAGGATTGCGAAGACAGTTTAGTAAACACCAAGAAAGACAAATAAATTCTGTTGAAACAAACTCATTGCCTGATTCTCTTGCTAATTCCTTGATTGAGGAGGAAGCGGTTCAACCACGGTCACTTGAAATACAAGAGAGTTCTGATGGCATATCGCTCAAGCCTTTTCCTGAAACCAATAAACATTCATTGGAAGTGTCAACAAATGGGAAAACAAATGCAAAGACCAATGCCATAAATGGTGATGAAGGAAAATGGCACAAAGTACCTTATTTACCATCATATGTACCATTTGGACAGCTTTATTTGTTGGGGAATTCCTCTGTAGAGTCATTATCAGGTGCAGAGTACTCGAAGTTGACATCGGTCAAATCAGTATTTGCTGAATTGAGGGAAAGATTTCAATCACATTCAATGAAATCATATCGATCTCGGTTTCAGAGAATCTTTGACTTATGTATGAACGATGATGCATCGTCTTTCTTAGGGATTGAGCAATGGCAACAGGCTTCTCATCTACAGCAATGGCTCGGGCTTGCAGCTGCAGACACTGTTGAGCTTGGGCATATAGTAGAATCTCCTACTATTCGTACTGCAACTTCTATTGTTCCTCTAGGATGGAATGGTGTGCCTGGAGCGAAAAATGGAGAACCTCTGAAAGTTGATATTACTGGTTTTGGGTTGCATCTCTGTACACTTGTTCATGCTCAAGTGAATGGTGACTGGTGTTCAACTACAGTTGAATCCTTTCCTTCTGCACCAAACTATTCTTCGAATCAAGAAATTCAGCCTGAGTTACAGAAGATGAGAGTATTAGTAGGTGCTCCGCAAAAAACGCCTCCAAAACATCAAACTGTGTTAGACTCTTTGATGCCTGTGTTTACTTCTGTTGATTCAATGACTGCTGGTAGTTCAGCCCCAGTTGACAATGATAAGTCCGTCCGTCCTGCAAGTTTAAATAACTTACTAATATTTTGCACCAGTGATTTTACAACTGTTTCCACAGAGGTTCATTTGAGAACTCGTAGAGTACGATTAGTTGGGCTGGAGGGATCTGGTAAAACTACTCTTTTAAAGGCAATTTTGAATAAAAGTAAACCAAGTACTGCAGCTTATGATGATGCAGTTTCAGATATTGACATGAATGAAGTTATTGCCGATGGTTTGTGCTATTGTGACTCTGTCGGAATAAATATGCAGGAGCTAAGTTCAGAAACCTCTCGCTTCAAGGATGAACTGTGGGCTGGAATTCGAGATCTAAATAGAAAAACTGATTTGATTGTTCTTGTTCATAACCTATCCCATAGTATACCTCGATATAATGATTCAAATGGTACTCAACAGAAGCCAGTTCTGTCACTTTTCTTGGATGAAGCTAAATGTCTTGGAATTCCTTGGGTTCTTGCAATAACAAACAAATTTGCAGTTAGTGCGCACCATCAAAAGTCAGCGATTGATGCTGCTTTGAAAGCTTACCAAGTCTCTCCTAGCTCGGTTGAAATTATAAACGCCTGCCCATATGTTATGCCTGGTTTTGCTGGGGCTTCTTTGTCGTGGGATGCTGCAACTAATGCAGAATCCAGTAAAAGGGTGGGTCCTCAAAACCTTTTATTCGCTCCTATCAATTTTGTTAGGAGGCCTTTCCTGAAAAGGGAGATTGTTCTTCAAGTTGAAGGTGTCACCGCACTATGTGAGAAAATCCATCGTGCACTTCGCAGTCATGAGGAGTCTTCGTTTCAGGAACTAGCCAGAGATAGACTGATGATGGAGTTGGCCAGAGAACAAGGAATATCAACTAATGCGAGTAAAAATGGTAAAGCTAAGGCAATTTCATTGAATTCTGCTGCTGTGGGTGCATCTGTTGGGGCTGGTCTTGGCCTTGTTCTGGCAATTGTAATGGGGGCAGCATCAGGGCTGAGGAATCCCTGA 3054 0.4198 MEFIQSRVEPWMREQGARLMKVSWVPLQWRMRWPWTNHREQKKRIKEEYQRRRKQLNDLCLALKTDSLSDLQDLLCCMVLSECVYKRPATEMIRAVNRFKADFGGQIVALERVQPSSDHVPHRYLLAETGDTLFASFIGTKQYKDVIADANILQGAIFHEDAAEESDGHVATESDKGENQSGKEYMWNPLESRSKQMKSKYKPAAHRGFMARAKGIPALELYRLAQKKKRKLVLCGHSLGGAVAALATLAILRVIAASSSSKENGNVSVKCITFSQPPVGNAALKDYINRKGWQHYFKSYCIPEDLVPRILSPAYFSHYNAQSVPVPSENESNSLLSREQEEGVAKRKGNDGEQLVLGVGPVQRSFWRLSRLVPLEGLRRQFSKHQERQINSVETNSLPDSLANSLIEEEAVQPRSLEIQESSDGISLKPFPETNKHSLEVSTNGKTNAKTNAINGDEGKWHKVPYLPSYVPFGQLYLLGNSSVESLSGAEYSKLTSVKSVFAELRERFQSHSMKSYRSRFQRIFDLCMNDDASSFLGIEQWQQASHLQQWLGLAAADTVELGHIVESPTIRTATSIVPLGWNGVPGAKNGEPLKVDITGFGLHLCTLVHAQVNGDWCSTTVESFPSAPNYSSNQEIQPELQKMRVLVGAPQKTPPKHQTVLDSLMPVFTSVDSMTAGSSAPVDNDKSVRPASLNNLLIFCTSDFTTVSTEVHLRTRRVRLVGLEGSGKTTLLKAILNKSKPSTAAYDDAVSDIDMNEVIADGLCYCDSVGINMQELSSETSRFKDELWAGIRDLNRKTDLIVLVHNLSHSIPRYNDSNGTQQKPVLSLFLDEAKCLGIPWVLAITNKFAVSAHHQKSAIDAALKAYQVSPSSVEIINACPYVMPGFAGASLSWDAATNAESSKRVGPQNLLFAPINFVRRPFLKREIVLQVEGVTALCEKIHRALRSHEESSFQELARDRLMMELAREQGISTNASKNGKAKAISLNSAAVGASVGAGLGLVLAIVMGAASGLRNP* 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0280 1017 MobiDBLite consensus disorder prediction 324 349 - -
Mtr8g0280 1017 MobiDBLite consensus disorder prediction 164 180 - -
Mtr8g0280 1017 Pfam 50S ribosome-binding GTPase 719 818 IPR006073 GO:0005525
Mtr8g0280 1017 CDD Ras_like_GTPase 721 879 - -
Mtr8g0280 1017 Gene3D alpha/beta hydrolase 74 354 IPR029058 -
Mtr8g0280 1017 Coils Coil 39 66 - -
Mtr8g0280 1017 MobiDBLite consensus disorder prediction 324 339 - -
Mtr8g0280 1017 SUPERFAMILY alpha/beta-Hydrolases 69 319 IPR029058 -
Mtr8g0280 1017 Pfam Lipase (class 3) 201 310 IPR002921 GO:0006629
Mtr8g0280 1017 MobiDBLite consensus disorder prediction 164 184 - -
Mtr8g0280 1017 Gene3D - 718 876 IPR027417 -
Mtr8g0280 1017 PANTHER F21O3.11 PROTEIN 28 1017 - -
Mtr8g0280 1017 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 718 846 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0280 1 1017 Acyl Lipid Metabolism Gene Families AT3G07400 60.467 0.0 1247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0280 - - gmx:100797051 1583.93