Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0270 ATGGATCATGAATACCACTTCAAGAGGAACCATGTACCAGCATTTGGTAGCTGGGATTGGAATGATAATCTTCCATTCACTCAATGCTTTGAATCTGCAAGACAAGGTGGTTTTCTACACTATAGTTACTCTGAAAGTAATGAAGATCAAGATCTTTATGTTGCTGGTGATTTGTATGATAATCATGTTGTTACTCCTGCAATGATTGTTGTTCCACGTAGAAGGGAAAAGGTACGTTCCCAACATGAAAAGGATGTGAAAAAGCAAAATTGGGTGAGCCATGTTGTGAAAGAACCACCAAGTCCCACTCCAATGTCAAGACCAACACCAAAGCCTGTTGATGAAGACTTGTACAAAATTTCACCAGATCTTCTTTATGTCAAAACTAGGAAGAAGAGAGGGTTGTGTTTCTTTCAAAGTTGCTTCACTTGCATTGCATGA 441 0.39 MDHEYHFKRNHVPAFGSWDWNDNLPFTQCFESARQGGFLHYSYSESNEDQDLYVAGDLYDNHVVTPAMIVVPRRREKVRSQHEKDVKKQNWVSHVVKEPPSPTPMSRPTPKPVDEDLYKISPDLLYVKTRKKRGLCFFQSCFTCIA* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0270 146 PANTHER EXPRESSED PROTEIN 5 143 - -
Mtr8g0270 146 PANTHER PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN-RELATED 5 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0270 Mtr-Chr8 2977734 2980074 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0270 - - gmx:100306260 226.483