Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0264 ATGAACATGACAGAAGAAGAGGTGAGGATGGTTTTAGGACGAAAATGGCCGGAGGCAGCTGGAGTGGCTCCAAGACGACAGGCTCAAACCAAAAGTACCATAGTCATTGGTGATTCTTTTACTGCACAAACCAGTACCTCTCCATGGTTGCTTTCACCTTCTGGTGACTTTGCCTTTGGTTTTCTTCCACTCAAAGACACTAATCTTTTTTTGCTTTCTATTTGGTATCCCAAAATTTCTGAGAAAACTGTTGTGTGGTATGCTAATGGAGACAGTCCTGCACCAAAAGGATCAAAAGTGGAACTCACTGCCAATGATGGGCTGGTGCTAACTTCCCCAAATGGTGTCAGGTTATGGAATACTGAAGGACTCAATGTTAAAGTTTCTCGCGGTGTGTTGAATGACACTGGCAACTTTGTGCTTCAGGATGGTAAATTCAACAGTCTGTGGGAGACTTTCAAGTTTCCTAGTGACACGTTATTGCCTTCTCAGGTTGTGGATAAAGGAAGAAAGCTTTCTTCAAGGCTTAAGGAGACAGATTTCAGTAAAGGAAGGTTTGAACTCATTTTACAAAGTGATGGTAATCTTGTTATGCATTCTATTAATTTACCATCTGGTTATGTTAATGAAAACTACTTTGAAAGTAATACTATTAAATCCAGTACATCAAGTGCTGGAGCTCAACTGGTCTTTGACAAATCAGGGTACTTGTATGTTTTGGGAGAGAACAATGAGAAATACAATGTGTTCGAAGAAGAGAGTAACGTCTCGACCACACAATTTTATCTTAGAGCAACTCTTAATTTTGATGGAGTGTTCACACTTTACAAGCATCCTAAGAGTTCAACTAAGAGTGAAGGTTGGACCACAGTATGGTCTAAGCCCTTTAATATATGTACTTATACTGTTAGTGCAGGTAGTGGTGTTTGTGGATATAATAGCTTCTGCACTTTGGGAGATGATAAGAGACCAAAATGTCAGTGTCCAAAACAGTACTCACTGATTGATCCTAATGATCCATATGGCAGCTGCAAGCCAGATTTCGTCCAAGGATGTGGAGAAGATGATCCAAGTAAAAAGAGAAATGATCTCTATGAGTTTGAGATTTTGATTGACACTGATTGGCCTCTATCAGATTATGTGCTTCAAAGGCCTTTTACTGAAGAACAGTGTAGGAAATCTTGTATGGATGATTGCTTGTGTTCTGTGGCTATTTTCAGGTTAGGTGATAGTTGTTGGAAGAAGAAGTTACCACTTTCAAATGGGAGAGTTGATGCAACTCTTAATGGTGCTAAGGCTTTCTTGAAAGTGAGAAAAGATAATGCCTCCCATGGTTCCACCGTACCTGTCACAAATTAG 1359 0.3996 MNMTEEEVRMVLGRKWPEAAGVAPRRQAQTKSTIVIGDSFTAQTSTSPWLLSPSGDFAFGFLPLKDTNLFLLSIWYPKISEKTVVWYANGDSPAPKGSKVELTANDGLVLTSPNGVRLWNTEGLNVKVSRGVLNDTGNFVLQDGKFNSLWETFKFPSDTLLPSQVVDKGRKLSSRLKETDFSKGRFELILQSDGNLVMHSINLPSGYVNENYFESNTIKSSTSSAGAQLVFDKSGYLYVLGENNEKYNVFEEESNVSTTQFYLRATLNFDGVFTLYKHPKSSTKSEGWTTVWSKPFNICTYTVSAGSGVCGYNSFCTLGDDKRPKCQCPKQYSLIDPNDPYGSCKPDFVQGCGEDDPSKKRNDLYEFEILIDTDWPLSDYVLQRPFTEEQCRKSCMDDCLCSVAIFRLGDSCWKKKLPLSNGRVDATLNGAKAFLKVRKDNASHGSTVPVTN* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0264 452 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 216 IPR036426 -
Mtr8g0264 452 Gene3D - 156 288 IPR036426 -
Mtr8g0264 452 CDD B_lectin 50 156 IPR001480 -
Mtr8g0264 452 Pfam D-mannose binding lectin 83 166 IPR001480 -
Mtr8g0264 452 Gene3D - 29 155 IPR036426 -
Mtr8g0264 452 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK1 32 443 - -
Mtr8g0264 452 PANTHER - 32 443 - -
Mtr8g0264 452 ProSiteProfiles Bulb-type lectin domain profile. 36 154 IPR001480 -
Mtr8g0264 452 SMART blect_4 42 156 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0264 Mtr-Chr8 2937853 2941463 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0264 - - mtr:MTR_8g011430 936.406