Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0262 ATGAACAAAACACGTAGCACTGTCTGTTTGGTCTTACTTCAGATTTACCTCAGCATTGTGCTGACAATTTCAGCACCTGAAACTGCCATTGTAACACAGGTTCCTGGTTTCAATGGAACAATACCTTCCAAGCATTATGCTGGGTATGTGACTGTGGATGAAAGTCATGGAAGGAATTTGTATTACTATTTTGTTGAGTCTGAAGGTAAACCTTCTGTGGATCCAGTTGTTCTTTGGCTTAATGGTGGACCTGGATGTTCTAGCTTTGATGGATTCATATATGAGCATGGTCCTTTCAATTTTGAAGCAGCAAAGACAAAGGGAAGCCTGCCAACTCTGCACCTCAATCCATACAGCTGGACCAAGGTTTCCAGTATTATATATTTGGACTCTCCTGCTGGTGTTGGGTTTTCATACTCTAAGAATGAAACTGATTACATAACCGGAGACATAAAGACTGCGTCTGATACACATGCCTTTCTCCTTAAGTGGTTTGAACTATATCCCGAGTTCCTTTCCAACCCTTTCTTCATTGCTGGAGAGTCATATGCAGGAGTTTATGTGCCTACTCTTGCCTATGAAGCAATGAAAGGGATTGATGCTGGTGTGAAGCCGAAACTGAATTTTAAGGGTTACATAGTTGGAAATGGTGTTACAGATGAACAAATTGATGGCAATGCTCTTGTTCCATTTGTACATGGGATGGGTCTTATCTCAGATGAATTGTTTGAGGAGGTTAACCGCGAGTGTAATGGGAATTTCTATAATTCACTCAGTGATAATTGTACAAACAAGCTTGCAAAAATTGATGAGGACATTGATGGGTTGAACGTATATAACATTCTAGAACCATGCTATCACGGCACAGAGGCAGATAAGATTATCACATCCTATATTAGGTTGCCGTCTAGTTTCCGCGAGTTAGGTGAGACTGAGAAACCTCATCCCGTGAGGAAAAGAATGTTCGGTCGCGCTTGGCCCCTTAGAGCACCTGTGAGAGATGGCAACGTACCAACATGGCCACAACTTATCAATAGCAACAATGTTCCATGCACAGATGGCTCTGTTGCAAATGCATGGTTGAACAATGAAGAAGTTAGGAAAGCAATTCACACTGCAGAGAAAAGTGTGGTCAGTAGTTGGGATTTATGCACAGACAAAATTTCCTTCGATCATGATGCTGGAAGCATGATAAAATACCACAAGAACCTAACTTCCAGAGGATATCGAGCTCTTATATTCAGTGGTGATCATGACATGTGTGTTCCATTTACTGGGAGTCAAGCATGGACGAGATCAATTGGATACAAGATTGTTGATGAATGGAGGCCATGGTTATCCAATGGTCAAGTTGTTGGGTATACTCAAGGATATGACCATAATCTTACTTTTCTGACCATAAAGGGAGCTGGACATACTGTTCCAGAATACAAACCACAAGAGGCATTGGATTTTTATAAACGTTTTCTGGCTGGATCCCCAATATGA 1488 0.414 MNKTRSTVCLVLLQIYLSIVLTISAPETAIVTQVPGFNGTIPSKHYAGYVTVDESHGRNLYYYFVESEGKPSVDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAAKTKGSLPTLHLNPYSWTKVSSIIYLDSPAGVGFSYSKNETDYITGDIKTASDTHAFLLKWFELYPEFLSNPFFIAGESYAGVYVPTLAYEAMKGIDAGVKPKLNFKGYIVGNGVTDEQIDGNALVPFVHGMGLISDELFEEVNRECNGNFYNSLSDNCTNKLAKIDEDIDGLNVYNILEPCYHGTEADKIITSYIRLPSSFRELGETEKPHPVRKRMFGRAWPLRAPVRDGNVPTWPQLINSNNVPCTDGSVANAWLNNEEVRKAIHTAEKSVVSSWDLCTDKISFDHDAGSMIKYHKNLTSRGYRALIFSGDHDMCVPFTGSQAWTRSIGYKIVDEWRPWLSNGQVVGYTQGYDHNLTFLTIKGAGHTVPEYKPQEALDFYKRFLAGSPI* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0262 495 Gene3D - 347 495 - -
Mtr8g0262 495 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Mtr8g0262 495 SUPERFAMILY alpha/beta-Hydrolases 31 494 IPR029058 -
Mtr8g0262 495 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 493 IPR001563 GO:0004185|GO:0006508
Mtr8g0262 495 ProSitePatterns Serine carboxypeptidases, histidine active site. 462 479 IPR033124 GO:0004185
Mtr8g0262 495 Pfam Serine carboxypeptidase 35 491 IPR001563 GO:0004185|GO:0006508
Mtr8g0262 495 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 18 493 - -
Mtr8g0262 495 Gene3D alpha/beta hydrolase 23 319 IPR029058 -
Mtr8g0262 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Mtr8g0262 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Mtr8g0262 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Mtr8g0262 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 462 475 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0262 Mtr-Chr8 2895881 2901586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0262 356 495 Calmodulin-binding Proteins AT2G22960 46.429 1.97e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0262 K16296 - gmx:100792057 892.108