Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0261 ATGGAAGCCTCAAAAAGGCCTTCTTCTTGTATCTCAAAGTGGCAATACTCATCAACCAAAAGCAAACTTGTGAGTAACTTCAATCCTGTTTGCCAAGCTGTCCAAAAATTAACATTCAGAGGAAAGTTTGTGATCATCTTGAATCAAAAGAAATCAATACCTGGAAAATTCATTTCTGTTCAGATTTATAGTGGCTCAGAAGTTGATCCTAATACTGGTAAAGGGTGGTTGAGTGAGAAAGCATATTTTAAGGAATGTGGGCGCAAGAAACCTCACCATGATGACGATGTTGATGATGCACAAACAAAGGTTAAGACATATAAAATTAAACTACAGGTTGACTCACATTTTGGAACTCCAAGGGCTTTTGTAATTCAAAACAAACAAAACAGGAAATTCTATCTTCTGTCTGCATCTATTGAGACTTGTACCAATAGAATCATTCACTTTGATTGCAATTCTTGGATTTATCCAATCAAGAAAACCAAATTTGATAGACTATTTTTCTCGAATAGATGCTATCTTCCAAGTCAAACACCTAGAGCATTAGCGGAACTAAGAAAAGAAGAGCTTGACAAATTGAGAGGTAATGGAATGGAAGAAAGAAAGGAATGGGATAGAATATACGACTATGACTACTACAATGACCTTGGCGATCCTGACAAAGGTTCGGAGCATTTTAGACCTATCTTGGGTGGTTCAAGGTTATATCCATATCCACGTCGAGTTAGAACAGGTCGAAAACATAGTGCAACAGGTCCATCATCTGAGAGCAGGCCACAAGCAACGAACTTTGATATATATGTTCCTTCAGATGAGATATTTAGCCCTAACAAATTGAAGGAGATCAAATCAAATTCTATCCAAGCCATTGTACATTTACTATCTTCAAAGACAGAATCATTACCTCAACAAAGTTCTAGAAGCTTTCAATCATTTAAAGAGATACTTGACATGCTCTCTACCAATAGAAACCAAACAATAGAAGGATTGATCAGAGACAACTTAAAGAAATTGGTACCAAATAAGTACTTAAAGGAAGTAACTCAGTCAATCAAGGAAAATCATTGGCATGTTCCTATCCCTCCAATCATACATGAAAAAGAATGGGCTTGGAATGATGACATGGAGTTTGGAAGACAAATGCTTGCAGGAACGCATCCTGTCCGAATCCAGTGCTTGATGACATTTCCACCTCAAAACAAATTTGGAGTACAGAGTTCAATTAAGAAATCAATCATAGAACAGATGCTTGAAGGATGGACGCTTCCTCAAGCTTTGGAACAAGGAAGAATATTCATGTTGGACCACCATGACTATCTCATGCCATACTTGAACAGAATAAATGCAAATGGGGTATCTGCTTATGCATCAAGGACACTTCTATTCTTAAGAAGTGATGGCATGCTTAAGCCACTGGCAATAGAACTCAGCTTGCCGGGATCATCTCTAGCTCTTGAAATCCAAAGAGTTTTTCTTCCATCAAAGCAAGGGACACAAGCAGCACTTTGGCAGCTTGCTAAAGCTCATGTTTTAGCTAATGATACTTTTTACCATATACTAGTAAGCCATTGGTTATACACACATGCAGTTGTTGAACCATTTATCCTTGCTACCAAAAGAAGGCTAAGTGAAATGCATCCAATCCATCGAATATTGAGTCCTCATTTCAAAGACACCATGCATATAAATGCCTTGACTAGACTTATCCTTATTAACTCTGGAGGAATTCTTGAGAGAATGTTATTTCCTGGTGAAACCTGTATGCAAATAACCTGTGATCTCTATAAAGAGTGGAAATTTACTGAACAAGGACTACCTGCTGATCTAATCAAAAGGAGCATGGCTTTAGAAGACCAAGATGAGAACAACTCAACTGGGATTCAACTTCTCATGTTGGACTATCCCTATGCCATTGATGGACTTGAAATATGGGTTGCCATCAAATCATGGGTCAGGGACTTCATCTCATTCTTCTACAAAGACAATGAAGCCATCATAGCTGATACTGAACTCCAAGTATGGTGGTCAGAGATTCGAACTATAGGCCACGGCGACAACCACAATGAGACATGGTGGTATCAAATGACAACACTCTCAGACCTTGTAGAAACGCTAACAACTCTCATATGGATTTCTGCGGCGCGTCATGCAGTTATAAACCACCAAAAACATGCACAAAATGGTAATTACCCTCCTAATTATCCTACACTATGTAGAAAGTTCATTCCACTAGAAGGAACAGTTGAGTTTGGTGAGTTCCTCAAGGATCCTGATAAATTCTTTATGAAGATGTTTCCTGATAGGTTTGAGATGAGTCTTGGTTTGACATTGGTAGATTTTCTATCAAAAAACAGTTATGATGAAGTGTACTTGTTGAGATGTCAACCATCACATGGTTGGATAGACAATGAAATTGTTCTCAACAGATTTGCTGAGTTCAAAGAAGAACTTAAGGAGATTCAGACAAGGGTTTTGCAAAGAAACAAAGATCCAAAGCTTAAGAATAGGCGCGGCCTTGCAAAAATTGATCACAATATTTTGTATCCTAAGATGCCTAGTTCTGGATCAAGAAGATGGAATCATGGGAAGAGGAGTGTCTTATAA 2607 0.3813 MEASKRPSSCISKWQYSSTKSKLVSNFNPVCQAVQKLTFRGKFVIILNQKKSIPGKFISVQIYSGSEVDPNTGKGWLSEKAYFKECGRKKPHHDDDVDDAQTKVKTYKIKLQVDSHFGTPRAFVIQNKQNRKFYLLSASIETCTNRIIHFDCNSWIYPIKKTKFDRLFFSNRCYLPSQTPRALAELRKEELDKLRGNGMEERKEWDRIYDYDYYNDLGDPDKGSEHFRPILGGSRLYPYPRRVRTGRKHSATGPSSESRPQATNFDIYVPSDEIFSPNKLKEIKSNSIQAIVHLLSSKTESLPQQSSRSFQSFKEILDMLSTNRNQTIEGLIRDNLKKLVPNKYLKEVTQSIKENHWHVPIPPIIHEKEWAWNDDMEFGRQMLAGTHPVRIQCLMTFPPQNKFGVQSSIKKSIIEQMLEGWTLPQALEQGRIFMLDHHDYLMPYLNRINANGVSAYASRTLLFLRSDGMLKPLAIELSLPGSSLALEIQRVFLPSKQGTQAALWQLAKAHVLANDTFYHILVSHWLYTHAVVEPFILATKRRLSEMHPIHRILSPHFKDTMHINALTRLILINSGGILERMLFPGETCMQITCDLYKEWKFTEQGLPADLIKRSMALEDQDENNSTGIQLLMLDYPYAIDGLEIWVAIKSWVRDFISFFYKDNEAIIADTELQVWWSEIRTIGHGDNHNETWWYQMTTLSDLVETLTTLIWISAARHAVINHQKHAQNGNYPPNYPTLCRKFIPLEGTVEFGEFLKDPDKFFMKMFPDRFEMSLGLTLVDFLSKNSYDEVYLLRCQPSHGWIDNEIVLNRFAEFKEELKEIQTRVLQRNKDPKLKNRRGLAKIDHNILYPKMPSSGSRRWNHGKRSVL* 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0261 868 Gene3D - 279 369 IPR027433 -
Mtr8g0261 868 Coils Coil 804 824 - -
Mtr8g0261 868 MobiDBLite consensus disorder prediction 242 263 - -
Mtr8g0261 868 Gene3D PLAT/LH2 domain 18 174 - -
Mtr8g0261 868 Gene3D - 175 277 - -
Mtr8g0261 868 PRINTS Lipoxygenase signature 501 518 IPR013819 GO:0016702|GO:0046872
Mtr8g0261 868 PRINTS Lipoxygenase signature 519 536 IPR013819 GO:0016702|GO:0046872
Mtr8g0261 868 PRINTS Lipoxygenase signature 539 559 IPR013819 GO:0016702|GO:0046872
Mtr8g0261 868 ProSiteProfiles PLAT domain profile. 39 170 IPR001024 GO:0005515
Mtr8g0261 868 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 46 174 IPR036392 GO:0005515
Mtr8g0261 868 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 173 858 IPR013819 GO:0016702|GO:0046872
Mtr8g0261 868 Gene3D - 370 496 - -
Mtr8g0261 868 Pfam Lipoxygenase 183 850 IPR013819 GO:0016702|GO:0046872
Mtr8g0261 868 SMART LH2_4 39 171 IPR001024 GO:0005515
Mtr8g0261 868 PRINTS Plant lipoxygenase signature 140 158 IPR001246 GO:0016491
Mtr8g0261 868 PRINTS Plant lipoxygenase signature 166 187 IPR001246 GO:0016491
Mtr8g0261 868 PRINTS Plant lipoxygenase signature 205 221 IPR001246 GO:0016491
Mtr8g0261 868 PRINTS Plant lipoxygenase signature 238 257 IPR001246 GO:0016491
Mtr8g0261 868 PRINTS Plant lipoxygenase signature 357 373 IPR001246 GO:0016491
Mtr8g0261 868 PRINTS Plant lipoxygenase signature 456 480 IPR001246 GO:0016491
Mtr8g0261 868 PRINTS Plant lipoxygenase signature 779 793 IPR001246 GO:0016491
Mtr8g0261 868 PANTHER LIPOXYGENASE 100 852 - -
Mtr8g0261 868 ProSitePatterns Lipoxygenases iron-binding region signature 2. 546 556 IPR020834 GO:0016702|GO:0046872
Mtr8g0261 868 SUPERFAMILY Lipoxigenase 175 852 IPR036226 -
Mtr8g0261 868 Gene3D - 497 857 - -
Mtr8g0261 868 MobiDBLite consensus disorder prediction 249 263 - -
Mtr8g0261 868 PANTHER LIPOXYGENASE 100 852 IPR000907 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0261 Mtr-Chr8 2890067 2895403 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0261 37 850 Acyl Lipid Metabolism Gene Families AT3G22400 42.840 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0261 K00454 - gmx:100793997 1321.22