Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0219 ATGGAGGACAAGGATTCAATTGCTAAAATGATAGACTCTACATCTTCGAAGATACAACAGCTGCAGAAGGCATTTGCTGAACTTGAAAGTTATCGAGCTGTTACTCTTAACTTGAAATGGAAAGAACTAGAAGAACATTTTCAAGGGCTGGAGAAATCTTTGAAGAGGCGTTTTAATGAACTGGAAGACCAAGAGAAAGAGTTTGAAAACAAGACGAGGAAAGCTCGGGAAATGTTGGAGAAACAGGAAGCTGCTGTTTTTGCTAAGGAGCAAGCCTTGCTGCAGAGACTTCAAAGGAAAAGAGATGCTTCTGTATTCACCATTGTAGATGCTCGAAAAAAGTACAGGAAGGTTTCATCAAAGGATTTGGGTACTGTCTTTAATGGGAGTCAAGCGGCACCAGATGTCAAGGAGAAACCTGTGGATGCTGTATCCACTGGGGCTGAATGCAACATAGAAAATGGGAAACTTTCTCCTGCAAATGTAAGTGTGGACATGATGTCTTATCCGGAGTTGGTAAAACTATGCAAAGAGATGGATGCTGCTGGACTTCACAAATTTATATCTGACAACCGTAAGAACCTTGCTGCTGTAAGGGAGGAAATACCACTTGCATTAAGAGCTGCCCCCAATGCTGGCTGTCTAGTTTTAGATTCTTTGGAAGGATTTTATTGTACGGAAGTGTCAAGTCAGGATATAAAGAAGGATGCTAACTTGCTGGGTCTTCGCAGAACCAGTATCATGTTGCTAGAATGTCTAAGTGATTTCCTGACCAATTTGGGTTCTGTTTCTAATGTGATTTCCAAAGATATCAAGGATAGGGCAAAGGCAGTTGCTGAAGAGTGGAAACCGAGATTGGATGATCTTGACATGGATGCTAGCAATGGGAATTCCTTGGAGGCTCATGCCTTTTTGCAACTTCTAGCTAGTTTTGGTATTGCCTCTGATTTTAATGAGGAGGAGTTATCCAGGCTAATTCCAATGGTATCTCGGCGTCGCCAAACTGCTGATTTATGCCGATGCCTTGGGTTGTCGGAGAAGATGCCTGGTGTGATTAAAGTTTTGGTAAAGAATGGGAGGCAAATTGATGCTGTTAACTTGGCTTTTGCATTTGATCTTACAGATCAGTTCTCACCTATTCCTCTGCTTAAGTCTTACCTGAATGATGCTAAGAAAACTTCTTCTCCAGTCAAGAGTGGTAACTCATCTCCCACTGCACAGCTTGATGTTAATGAAAGAGAGCTGTTTGCTCTTAAGGCCGTAATCAAATGCATTGAAGAACATAAACTTGAGGAGCAGTATCCAATCGATTCTCTCCAGAAACGAATGATCCAACTAGAGAAGGCCAAGGCCGATAAGAAGAGGGAAACTGAAGCGACAAAGCCTCAACCCAAAAGACCCCGTGCTAATGGTGCTGGATATGGTCCCCGTGTCACTAACATTCCTTTTGACAAAACTTCCTATGGTAGAGTTGCTGACAGGTACCCTCAATACGTGTATGACCGCCCTTACATGTACCCTGCACCAACTGAAAATCACTGTGCCCCTTTCCTGGCTTCTGCAACCTATAACGTCTCTCCTAATCCTGGAACTTACTTTGGAAATGGCTACCAATATCAAGCTACATATCTCCACTAA 1638 0.4274 MEDKDSIAKMIDSTSSKIQQLQKAFAELESYRAVTLNLKWKELEEHFQGLEKSLKRRFNELEDQEKEFENKTRKAREMLEKQEAAVFAKEQALLQRLQRKRDASVFTIVDARKKYRKVSSKDLGTVFNGSQAAPDVKEKPVDAVSTGAECNIENGKLSPANVSVDMMSYPELVKLCKEMDAAGLHKFISDNRKNLAAVREEIPLALRAAPNAGCLVLDSLEGFYCTEVSSQDIKKDANLLGLRRTSIMLLECLSDFLTNLGSVSNVISKDIKDRAKAVAEEWKPRLDDLDMDASNGNSLEAHAFLQLLASFGIASDFNEEELSRLIPMVSRRRQTADLCRCLGLSEKMPGVIKVLVKNGRQIDAVNLAFAFDLTDQFSPIPLLKSYLNDAKKTSSPVKSGNSSPTAQLDVNERELFALKAVIKCIEEHKLEEQYPIDSLQKRMIQLEKAKADKKRETEATKPQPKRPRANGAGYGPRVTNIPFDKTSYGRVADRYPQYVYDRPYMYPAPTENHCAPFLASATYNVSPNPGTYFGNGYQYQATYLH* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0219 545 Coils Coil 436 456 - -
Mtr8g0219 545 Pfam Frigida-like protein 168 457 IPR012474 -
Mtr8g0219 545 Coils Coil 47 85 - -
Mtr8g0219 545 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 4 545 - -
Mtr8g0219 545 PANTHER FRIGIDA-LIKE PROTEIN 4 545 - -
Mtr8g0219 545 MobiDBLite consensus disorder prediction 450 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0219 Mtr-Chr8 2465998 2471572 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0219 - - gmx:100806993 893.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0219 8 2465998 2471572 Mtr8g0219 8 2465998 2471572 ECH