Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0198 ATGGGACAAATCTTCGATAAATTACAAGGTGAGGAGTGGAGAAAAAAGCAAATTAGGAAGATAACAGATCGAGTTTTTCAGAATGTAAGGAATCAAGTCCAAACCGAGTACTTGAGTTTCGAAGATTTGTATATTGCTGTTCTACTTGTCTACAATGATATCAACAAGATTATTCCTGGTCCTCATTTCGATCCTCCATCAAAAGAAACTGTCAAACAAATCATGCAGGAATGTGATATGAACTTGGATGGGGCAATTGATCATGACGAATTTTGCGATTTCATCCAGAAAATGACAGCTGATACATTCACTGTTGTTAGTCAGAAACTTATCATCACTTTGGTCGTAGCACCAAGTGTTGCAATGGCAACAAAAAGAGCCACTGAAGGTGTCCCTGGTGTTGGAAAAGTGGTGCAGAAGTTACCGAATGCAATTTATGCATCCCTTGTTACCCTTGCAGTTGTGTGGTTCCAAAAGATGGGAGACGAGCCTGTAATCTGA 501 0.3972 MGQIFDKLQGEEWRKKQIRKITDRVFQNVRNQVQTEYLSFEDLYIAVLLVYNDINKIIPGPHFDPPSKETVKQIMQECDMNLDGAIDHDEFCDFIQKMTADTFTVVSQKLIITLVVAPSVAMATKRATEGVPGVGKVVQKLPNAIYASLVTLAVVWFQKMGDEPVI* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0198 166 SMART efh_1 70 98 IPR002048 GO:0005509
Mtr8g0198 166 ProSiteProfiles EF-hand calcium-binding domain profile. 66 101 IPR002048 GO:0005509
Mtr8g0198 166 PANTHER CALCIUM-BINDING EF HAND PROTEIN 4 162 - -
Mtr8g0198 166 SUPERFAMILY EF-hand 30 100 IPR011992 -
Mtr8g0198 166 PANTHER S100 CALCIUM-BINDING PROTEIN 4 162 - -
Mtr8g0198 166 Gene3D - 4 111 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0198 1 156 EF-hand Containing Proteins AT1G64850 67.949 4.93e-79 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0198 - - gmx:100526914 261.151